Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
IRX3P78415 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
IRX3P78415 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
IRX3P78415 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.32■□□□□ 0.68
IRX3P78415 AP3S2-216ENST00000617003 1561 ntBASIC19.32■□□□□ 0.68
IRX3P78415 LINC00896-202ENST00000609602 2128 ntBASIC19.31■□□□□ 0.68
IRX3P78415 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 FRMD8P1-201ENST00000440433 1524 ntBASIC19.31■□□□□ 0.68
IRX3P78415 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.31■□□□□ 0.68
IRX3P78415 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
IRX3P78415 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
IRX3P78415 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
IRX3P78415 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.31■□□□□ 0.68
IRX3P78415 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.31■□□□□ 0.68
IRX3P78415 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.31■□□□□ 0.68
IRX3P78415 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.31■□□□□ 0.68
IRX3P78415 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.31■□□□□ 0.68
IRX3P78415 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
IRX3P78415 SPDYE12P-201ENST00000618416 771 ntBASIC19.31■□□□□ 0.68
IRX3P78415 AL358472.5-202ENST00000641448 1267 ntBASIC19.31■□□□□ 0.68
IRX3P78415 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
IRX3P78415 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
IRX3P78415 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
IRX3P78415 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
IRX3P78415 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
IRX3P78415 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
IRX3P78415 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
IRX3P78415 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 LINC00895-201ENST00000629028 1637 ntBASIC19.3■□□□□ 0.68
IRX3P78415 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.3■□□□□ 0.68
IRX3P78415 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.3■□□□□ 0.68
IRX3P78415 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.3■□□□□ 0.68
IRX3P78415 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.3■□□□□ 0.68
IRX3P78415 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.3■□□□□ 0.68
IRX3P78415 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.3■□□□□ 0.68
IRX3P78415 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.3■□□□□ 0.68
IRX3P78415 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.3■□□□□ 0.68
IRX3P78415 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.3■□□□□ 0.68
IRX3P78415 AC007967.4-201ENST00000614700 386 ntBASIC19.3■□□□□ 0.68
IRX3P78415 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
IRX3P78415 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
IRX3P78415 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
IRX3P78415 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
IRX3P78415 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.3■□□□□ 0.68
IRX3P78415 PKD1P1-201ENST00000458669 6805 ntBASIC19.3■□□□□ 0.68
IRX3P78415 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.29■□□□□ 0.68
IRX3P78415 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.29■□□□□ 0.68
IRX3P78415 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX3P78415 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.29■□□□□ 0.68
IRX3P78415 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX3P78415 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.29■□□□□ 0.68
IRX3P78415 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC19.29■□□□□ 0.68
IRX3P78415 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IRX3P78415 PIN1P1-201ENST00000412108 996 ntBASIC19.29■□□□□ 0.68
IRX3P78415 MRPS18AP1-201ENST00000414458 589 ntBASIC19.29■□□□□ 0.68
IRX3P78415 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.29■□□□□ 0.68
IRX3P78415 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms