Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PRAMEP78395 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.81■□□□□ 0.28
PRAMEP78395 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PRAMEP78395 LINC02199-201ENST00000506655 2702 ntBASIC16.81■□□□□ 0.28
PRAMEP78395 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.81■□□□□ 0.28
PRAMEP78395 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.81■□□□□ 0.28
PRAMEP78395 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEP78395 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.8■□□□□ 0.28
PRAMEP78395 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PRAMEP78395 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.8■□□□□ 0.28
PRAMEP78395 AC087641.1-201ENST00000557561 1021 ntBASIC16.8■□□□□ 0.28
PRAMEP78395 AP001005.1-201ENST00000571755 1248 ntBASIC16.8■□□□□ 0.28
PRAMEP78395 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 MIR7706-201ENST00000613747 67 ntBASIC16.8■□□□□ 0.28
PRAMEP78395 AC004790.2-201ENST00000623588 572 ntBASIC16.8■□□□□ 0.28
PRAMEP78395 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.8■□□□□ 0.28
PRAMEP78395 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.8■□□□□ 0.28
PRAMEP78395 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PRAMEP78395 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
PRAMEP78395 FLJ16779-201ENST00000612722 7638 ntBASIC16.79■□□□□ 0.28
PRAMEP78395 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.79■□□□□ 0.28
PRAMEP78395 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEP78395 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEP78395 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.79■□□□□ 0.28
PRAMEP78395 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEP78395 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEP78395 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PRAMEP78395 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 PMS2P1-201ENST00000431037 1228 ntBASIC16.79■□□□□ 0.28
PRAMEP78395 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEP78395 AL662844.1-201ENST00000546340 181 ntBASIC16.79■□□□□ 0.28
PRAMEP78395 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.79■□□□□ 0.28
PRAMEP78395 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.79■□□□□ 0.28
PRAMEP78395 MIR4751-201ENST00000578027 74 ntBASIC16.79■□□□□ 0.28
PRAMEP78395 AL049840.3-201ENST00000602669 611 ntBASIC16.79■□□□□ 0.28
PRAMEP78395 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PRAMEP78395 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PRAMEP78395 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PRAMEP78395 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.79■□□□□ 0.28
PRAMEP78395 SLC22A20-204ENST00000530038 1673 ntBASIC16.78■□□□□ 0.28
PRAMEP78395 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms