Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 AC007967.2-201ENST00000432613 625 ntBASIC14.81□□□□□ -0.04
CSNK1A1P48729 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 AL031432.2-201ENST00000566714 459 ntBASIC14.81□□□□□ -0.04
CSNK1A1P48729 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 AL928711.1-201ENST00000570165 459 ntBASIC14.81□□□□□ -0.04
CSNK1A1P48729 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 AC007064.4-201ENST00000637740 555 ntBASIC14.81□□□□□ -0.04
CSNK1A1P48729 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
CSNK1A1P48729 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CSNK1A1P48729 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 AL512652.2-201ENST00000625156 1716 ntBASIC14.8□□□□□ -0.04
CSNK1A1P48729 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.8□□□□□ -0.04
CSNK1A1P48729 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 AC023141.13-201ENST00000604991 943 ntBASIC14.8□□□□□ -0.04
CSNK1A1P48729 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CSNK1A1P48729 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CSNK1A1P48729 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CSNK1A1P48729 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 HMGA1P7-201ENST00000406908 502 ntBASIC14.79□□□□□ -0.04
CSNK1A1P48729 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 RHOQP3-201ENST00000437982 621 ntBASIC14.79□□□□□ -0.04
CSNK1A1P48729 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 SLC25A1P1-201ENST00000528351 927 ntBASIC14.79□□□□□ -0.04
CSNK1A1P48729 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.79□□□□□ -0.04
CSNK1A1P48729 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms