Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABRA4P48169 GGT3P-204ENST00000453783 1664 ntBASIC15.7■□□□□ 0.1
GABRA4P48169 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GABRA4P48169 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABRA4P48169 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GABRA4P48169 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.69■□□□□ 0.1
GABRA4P48169 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.69■□□□□ 0.1
GABRA4P48169 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.69■□□□□ 0.1
GABRA4P48169 FAM220BP-201ENST00000377689 816 ntBASIC15.69■□□□□ 0.1
GABRA4P48169 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.69■□□□□ 0.1
GABRA4P48169 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.69■□□□□ 0.1
GABRA4P48169 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 FAM86GP-201ENST00000448322 971 ntBASIC15.69■□□□□ 0.1
GABRA4P48169 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.69■□□□□ 0.1
GABRA4P48169 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 AC067863.1-201ENST00000494933 530 ntBASIC15.69■□□□□ 0.1
GABRA4P48169 AL390955.2-201ENST00000603032 514 ntBASIC15.69■□□□□ 0.1
GABRA4P48169 SPTSSB-204ENST00000617024 1292 ntBASIC15.69■□□□□ 0.1
GABRA4P48169 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.69■□□□□ 0.1
GABRA4P48169 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
GABRA4P48169 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GABRA4P48169 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.69■□□□□ 0.1
GABRA4P48169 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
GABRA4P48169 TUBB3P1-201ENST00000405796 1332 ntBASIC15.68■□□□□ 0.1
GABRA4P48169 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
GABRA4P48169 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.68■□□□□ 0.1
GABRA4P48169 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.68■□□□□ 0.1
GABRA4P48169 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.68■□□□□ 0.1
GABRA4P48169 SPDYE7P-202ENST00000420373 878 ntBASIC15.68■□□□□ 0.1
GABRA4P48169 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.68■□□□□ 0.1
GABRA4P48169 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.68■□□□□ 0.1
GABRA4P48169 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 AC098859.1-201ENST00000502915 1238 ntBASIC15.68■□□□□ 0.1
GABRA4P48169 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.68■□□□□ 0.1
GABRA4P48169 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 DUX4L27-201ENST00000554796 1261 ntBASIC15.68■□□□□ 0.1
GABRA4P48169 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GABRA4P48169 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.68■□□□□ 0.1
GABRA4P48169 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.68■□□□□ 0.1
GABRA4P48169 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GABRA4P48169 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GABRA4P48169 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.67■□□□□ 0.1
GABRA4P48169 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.67■□□□□ 0.1
GABRA4P48169 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.67■□□□□ 0.1
GABRA4P48169 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.67■□□□□ 0.1
GABRA4P48169 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.67■□□□□ 0.1
GABRA4P48169 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GABRA4P48169 AC005498.2-205ENST00000593218 784 ntBASIC15.67■□□□□ 0.1
GABRA4P48169 MIR6080-201ENST00000617359 66 ntBASIC15.67■□□□□ 0.1
GABRA4P48169 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
GABRA4P48169 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 AC106886.4-201ENST00000623557 2502 ntBASIC15.67■□□□□ 0.1
GABRA4P48169 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
GABRA4P48169 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.67■□□□□ 0.1
GABRA4P48169 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GABRA4P48169 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GABRA4P48169 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms