Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEDD4P46934 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NEDD4P46934 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NEDD4P46934 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEDD4P46934 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEDD4P46934 CNN2P11-201ENST00000429351 262 ntBASIC19.5■□□□□ 0.71
NEDD4P46934 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.5■□□□□ 0.71
NEDD4P46934 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.5■□□□□ 0.71
NEDD4P46934 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.5■□□□□ 0.71
NEDD4P46934 PRYP6-201ENST00000514804 343 ntBASIC19.5■□□□□ 0.71
NEDD4P46934 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.5■□□□□ 0.71
NEDD4P46934 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEDD4P46934 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
NEDD4P46934 AC020765.3-201ENST00000613051 740 ntBASIC19.5■□□□□ 0.71
NEDD4P46934 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NEDD4P46934 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.49■□□□□ 0.71
NEDD4P46934 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 ME2P1-201ENST00000426028 1970 ntBASIC19.49■□□□□ 0.71
NEDD4P46934 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NEDD4P46934 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.49■□□□□ 0.71
NEDD4P46934 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.49■□□□□ 0.71
NEDD4P46934 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
NEDD4P46934 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.49■□□□□ 0.71
NEDD4P46934 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 AL662844.4-201ENST00000606367 2838 ntBASIC19.49■□□□□ 0.71
NEDD4P46934 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NEDD4P46934 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.49■□□□□ 0.71
NEDD4P46934 AL627223.1-201ENST00000416693 442 ntBASIC19.49■□□□□ 0.71
NEDD4P46934 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NEDD4P46934 AL592309.1-201ENST00000443127 649 ntBASIC19.49■□□□□ 0.71
NEDD4P46934 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.49■□□□□ 0.71
NEDD4P46934 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.49■□□□□ 0.71
NEDD4P46934 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.49■□□□□ 0.71
NEDD4P46934 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.49■□□□□ 0.71
NEDD4P46934 AC027307.2-201ENST00000591252 911 ntBASIC19.49■□□□□ 0.71
NEDD4P46934 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.49■□□□□ 0.71
NEDD4P46934 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.49■□□□□ 0.71
NEDD4P46934 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.48■□□□□ 0.71
NEDD4P46934 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.48■□□□□ 0.71
NEDD4P46934 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.48■□□□□ 0.71
NEDD4P46934 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.48■□□□□ 0.71
NEDD4P46934 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
NEDD4P46934 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.48■□□□□ 0.71
NEDD4P46934 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.48■□□□□ 0.71
NEDD4P46934 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.48■□□□□ 0.71
NEDD4P46934 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.48■□□□□ 0.71
NEDD4P46934 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NEDD4P46934 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.48■□□□□ 0.71
NEDD4P46934 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.48■□□□□ 0.71
NEDD4P46934 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.48■□□□□ 0.71
NEDD4P46934 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.48■□□□□ 0.71
NEDD4P46934 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NEDD4P46934 AC142381.1-201ENST00000426099 345 ntBASIC19.48■□□□□ 0.71
NEDD4P46934 FAM58DP-201ENST00000428076 619 ntBASIC19.48■□□□□ 0.71
NEDD4P46934 AC093724.1-201ENST00000448659 1027 ntBASIC19.48■□□□□ 0.71
NEDD4P46934 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.48■□□□□ 0.71
NEDD4P46934 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.48■□□□□ 0.71
NEDD4P46934 AC008267.7-201ENST00000624570 1194 ntBASIC19.48■□□□□ 0.71
NEDD4P46934 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEDD4P46934 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.47■□□□□ 0.71
NEDD4P46934 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NEDD4P46934 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
NEDD4P46934 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.47■□□□□ 0.71
NEDD4P46934 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.47■□□□□ 0.71
NEDD4P46934 AC092364.2-201ENST00000596710 2692 ntBASIC19.47■□□□□ 0.71
NEDD4P46934 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEDD4P46934 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms