Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A4P31645 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17■□□□□ 0.31
SLC6A4P31645 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17■□□□□ 0.31
SLC6A4P31645 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A4P31645 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17■□□□□ 0.31
SLC6A4P31645 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A4P31645 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17■□□□□ 0.31
SLC6A4P31645 ALG1L8P-201ENST00000533887 760 ntBASIC17■□□□□ 0.31
SLC6A4P31645 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17■□□□□ 0.31
SLC6A4P31645 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17■□□□□ 0.31
SLC6A4P31645 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SLC6A4P31645 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17■□□□□ 0.31
SLC6A4P31645 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17■□□□□ 0.31
SLC6A4P31645 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17■□□□□ 0.31
SLC6A4P31645 AC106028.4-201ENST00000614509 607 ntBASIC17■□□□□ 0.31
SLC6A4P31645 AP001059.3-201ENST00000619053 235 ntBASIC17■□□□□ 0.31
SLC6A4P31645 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A4P31645 Z92544.3-201ENST00000624747 417 ntBASIC17■□□□□ 0.31
SLC6A4P31645 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A4P31645 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17■□□□□ 0.31
SLC6A4P31645 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 GGT3P-204ENST00000453783 1664 ntBASIC17■□□□□ 0.31
SLC6A4P31645 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SLC6A4P31645 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SLC6A4P31645 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SLC6A4P31645 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A4P31645 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A4P31645 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SLC6A4P31645 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A4P31645 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SLC6A4P31645 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SLC6A4P31645 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.99■□□□□ 0.31
SLC6A4P31645 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.99■□□□□ 0.31
SLC6A4P31645 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A4P31645 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC6A4P31645 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A4P31645 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC6A4P31645 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.99■□□□□ 0.31
SLC6A4P31645 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.99■□□□□ 0.31
SLC6A4P31645 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC6A4P31645 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.99■□□□□ 0.31
SLC6A4P31645 AC025678.2-201ENST00000562061 970 ntBASIC16.99■□□□□ 0.31
SLC6A4P31645 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 AC020765.3-201ENST00000613051 740 ntBASIC16.99■□□□□ 0.31
SLC6A4P31645 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A4P31645 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.99■□□□□ 0.31
SLC6A4P31645 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SLC6A4P31645 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SLC6A4P31645 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SLC6A4P31645 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SLC6A4P31645 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SLC6A4P31645 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SLC6A4P31645 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SLC6A4P31645 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SLC6A4P31645 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
SLC6A4P31645 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.98■□□□□ 0.31
SLC6A4P31645 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 CYMP-203ENST00000474680 1263 ntBASIC16.98■□□□□ 0.31
SLC6A4P31645 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC6A4P31645 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 AL512356.2-201ENST00000546955 174 ntBASIC16.98■□□□□ 0.31
SLC6A4P31645 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.98■□□□□ 0.31
SLC6A4P31645 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC6A4P31645 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.98■□□□□ 0.31
SLC6A4P31645 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.98■□□□□ 0.31
SLC6A4P31645 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SLC6A4P31645 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms