Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPS1P31327 HCG18-245ENST00000602550 559 ntTSL 4 BASIC23.05■■□□□ 1.28
CPS1P31327 AC026979.3-201ENST00000607315 403 ntBASIC23.05■■□□□ 1.28
CPS1P31327 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.05■■□□□ 1.28
CPS1P31327 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPS1P31327 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC23.05■■□□□ 1.28
CPS1P31327 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CPS1P31327 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CPS1P31327 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC23.05■■□□□ 1.28
CPS1P31327 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CPS1P31327 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CPS1P31327 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPS1P31327 KRT8P22-201ENST00000562317 1415 ntBASIC23.05■■□□□ 1.28
CPS1P31327 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CPS1P31327 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC23.04■■□□□ 1.28
CPS1P31327 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC23.04■■□□□ 1.28
CPS1P31327 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 BTBD6P1-201ENST00000412176 1267 ntBASIC23.04■■□□□ 1.28
CPS1P31327 RPL28-203ENST00000428193 573 ntTSL 2 BASIC23.04■■□□□ 1.28
CPS1P31327 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC23.04■■□□□ 1.28
CPS1P31327 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 RPL28-207ENST00000558815 616 ntTSL 2 BASIC23.04■■□□□ 1.28
CPS1P31327 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC23.04■■□□□ 1.28
CPS1P31327 U62317.3-201ENST00000608319 855 ntBASIC23.04■■□□□ 1.28
CPS1P31327 AL139011.1-202ENST00000642063 584 ntBASIC23.04■■□□□ 1.28
CPS1P31327 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CPS1P31327 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC23.04■■□□□ 1.28
CPS1P31327 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 PC-204ENST00000524491 1714 ntTSL 2 BASIC23.04■■□□□ 1.28
CPS1P31327 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPS1P31327 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC23.04■■□□□ 1.28
CPS1P31327 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CPS1P31327 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CPS1P31327 ARTN-209ENST00000479128 471 ntTSL 3 BASIC23.03■■□□□ 1.28
CPS1P31327 AC091271.1-201ENST00000611877 1162 ntBASIC23.03■■□□□ 1.28
CPS1P31327 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC23.03■■□□□ 1.28
CPS1P31327 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 CROCCP2-202ENST00000412962 2773 ntBASIC23.03■■□□□ 1.28
CPS1P31327 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CPS1P31327 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CPS1P31327 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CPS1P31327 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC23.03■■□□□ 1.28
CPS1P31327 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC23.03■■□□□ 1.28
CPS1P31327 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC23.03■■□□□ 1.28
CPS1P31327 NEU3-202ENST00000526068 431 ntTSL 2 BASIC23.03■■□□□ 1.28
CPS1P31327 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 ACTG1P17-201ENST00000558391 1119 ntBASIC23.03■■□□□ 1.28
CPS1P31327 MIR4706-201ENST00000582134 82 ntBASIC23.03■■□□□ 1.28
CPS1P31327 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 AC020765.3-201ENST00000613051 740 ntBASIC23.03■■□□□ 1.28
CPS1P31327 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPS1P31327 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CPS1P31327 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC23.02■■□□□ 1.28
CPS1P31327 AC092053.1-201ENST00000605787 1936 ntBASIC23.02■■□□□ 1.28
CPS1P31327 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC23.02■■□□□ 1.28
CPS1P31327 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CPS1P31327 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CPS1P31327 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CPS1P31327 ZBTB12BP-201ENST00000314232 1122 ntBASIC23.02■■□□□ 1.28
CPS1P31327 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CPS1P31327 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC23.02■■□□□ 1.28
CPS1P31327 BCRP2-202ENST00000447763 634 ntBASIC23.02■■□□□ 1.28
CPS1P31327 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPS1P31327 BCRP6-201ENST00000510112 632 ntBASIC23.02■■□□□ 1.28
CPS1P31327 BCRP7-201ENST00000511549 544 ntBASIC23.02■■□□□ 1.28
CPS1P31327 AP001889.1-201ENST00000525414 633 ntBASIC23.02■■□□□ 1.28
CPS1P31327 MBP-227ENST00000526111 581 ntTSL 4 BASIC23.02■■□□□ 1.28
CPS1P31327 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC23.02■■□□□ 1.28
CPS1P31327 AP001258.2-201ENST00000529891 490 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms