Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
EPHA3P29320 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
EPHA3P29320 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 ABCD1P5-201ENST00000445663 754 ntBASIC16.22■□□□□ 0.19
EPHA3P29320 LINC00265-3P-201ENST00000447588 903 ntBASIC16.22■□□□□ 0.19
EPHA3P29320 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
EPHA3P29320 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.22■□□□□ 0.19
EPHA3P29320 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
EPHA3P29320 AP002414.4-201ENST00000589764 1148 ntBASIC16.22■□□□□ 0.19
EPHA3P29320 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.22■□□□□ 0.19
EPHA3P29320 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.22■□□□□ 0.19
EPHA3P29320 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.22■□□□□ 0.19
EPHA3P29320 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 PRAL-201ENST00000624952 3286 ntBASIC16.22■□□□□ 0.19
EPHA3P29320 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 REXO1L8P-201ENST00000604378 1897 ntBASIC16.22■□□□□ 0.19
EPHA3P29320 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
EPHA3P29320 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
EPHA3P29320 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
EPHA3P29320 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
EPHA3P29320 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.21■□□□□ 0.19
EPHA3P29320 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA3P29320 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.21■□□□□ 0.19
EPHA3P29320 AP002414.2-201ENST00000591780 3365 ntBASIC16.21■□□□□ 0.19
EPHA3P29320 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
EPHA3P29320 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EPHA3P29320 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 RCN1P1-201ENST00000400413 996 ntBASIC16.21■□□□□ 0.19
EPHA3P29320 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA3P29320 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
EPHA3P29320 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.21■□□□□ 0.19
EPHA3P29320 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.21■□□□□ 0.19
EPHA3P29320 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.21■□□□□ 0.19
EPHA3P29320 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.21■□□□□ 0.19
EPHA3P29320 AC010331.1-201ENST00000611423 582 ntBASIC16.21■□□□□ 0.19
EPHA3P29320 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
EPHA3P29320 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
EPHA3P29320 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA3P29320 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.21■□□□□ 0.19
EPHA3P29320 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.21■□□□□ 0.19
EPHA3P29320 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
EPHA3P29320 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.21■□□□□ 0.18
EPHA3P29320 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
EPHA3P29320 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
EPHA3P29320 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
EPHA3P29320 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
EPHA3P29320 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
EPHA3P29320 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
EPHA3P29320 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
EPHA3P29320 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.2■□□□□ 0.18
EPHA3P29320 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.2■□□□□ 0.18
EPHA3P29320 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
EPHA3P29320 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
EPHA3P29320 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms