Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 FDPS-213ENST00000489003 976 ntTSL 214.87□□□□□ -0.031e-7■■□□□ 13.7
RPS3P23396 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC13.27□□□□□ -0.291e-9■■□□□ 13.7
RPS3P23396 PRKCSH-207ENST00000588269 557 ntTSL 511.42□□□□□ -0.588e-8■■□□□ 13.7
RPS3P23396 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.013e-11■■□□□ 13.7
RPS3P23396 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.253e-11■■□□□ 13.7
RPS3P23396 MCMBP-205ENST00000569515 499 ntTSL 513.41□□□□□ -0.263e-11■■□□□ 13.7
RPS3P23396 KDELR2-202ENST00000382267 583 ntTSL 49.83□□□□□ -0.843e-11■■□□□ 13.7
RPS3P23396 MCMBP-203ENST00000466047 2298 ntTSL 29.06□□□□□ -0.963e-11■■□□□ 13.7
RPS3P23396 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.19□□□□□ -1.13e-11■■□□□ 13.7
RPS3P23396 PRAME-208ENST00000438888 566 ntAPPRIS ALT2 TSL 412.12□□□□□ -0.471e-16■■□□□ 13.7
RPS3P23396 MIR3615-201ENST00000581999 87 ntBASIC14.11□□□□□ -0.158e-8■■□□□ 13.7
RPS3P23396 HM13-221ENST00000493364 372 ntTSL 211.29□□□□□ -0.61e-17■■□□□ 13.7
RPS3P23396 RACK1-212ENST00000505461 1005 ntTSL 59.89□□□□□ -0.834e-19■■□□□ 13.7
RPS3P23396 RACK1-215ENST00000507261 590 ntTSL 38.41□□□□□ -1.064e-19■■□□□ 13.7
RPS3P23396 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.56□□□□□ -1.364e-19■■□□□ 13.7
RPS3P23396 RACK1-220ENST00000508963 581 ntTSL 26.21□□□□□ -1.424e-19■■□□□ 13.7
RPS3P23396 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.222e-7■■□□□ 13.7
RPS3P23396 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.42e-7■■□□□ 13.7
RPS3P23396 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC11.65□□□□□ -0.542e-7■■□□□ 13.7
RPS3P23396 ERGIC3-206ENST00000416206 1235 ntTSL 511.06□□□□□ -0.642e-7■■□□□ 13.7
RPS3P23396 MGAT5-203ENST00000468758 816 ntTSL 524.24■■□□□ 1.479e-11■■□□□ 13.7
RPS3P23396 MGAT5-204ENST00000481801 651 ntTSL 324.24■■□□□ 1.479e-11■■□□□ 13.7
RPS3P23396 ATP1A1-209ENST00000491156 666 ntTSL 28.09□□□□□ -1.112e-12■■□□□ 13.7
RPS3P23396 ASGR1-207ENST00000574330 887 ntTSL 515.74■□□□□ 0.111e-16■■□□□ 13.7
RPS3P23396 JPT1-212ENST00000584079 382 ntTSL 58.2□□□□□ -1.12e-9■■□□□ 13.7
RPS3P23396 COASY-205ENST00000586771 742 ntTSL 314.18□□□□□ -0.148e-7■■□□□ 13.7
RPS3P23396 FDPS-210ENST00000474345 713 ntTSL 314.87□□□□□ -0.031e-7■■□□□ 13.7
RPS3P23396 FDPS-219ENST00000495308 808 ntTSL 213.28□□□□□ -0.281e-7■■□□□ 13.7
RPS3P23396 FDPS-204ENST00000461507 1022 ntTSL 212.33□□□□□ -0.441e-7■■□□□ 13.7
RPS3P23396 FDPS-209ENST00000471117 630 ntTSL 38.23□□□□□ -1.091e-7■■□□□ 13.7
RPS3P23396 ITIH3-206ENST00000465314 456 ntTSL 311.01□□□□□ -0.657e-13■■□□□ 13.7
RPS3P23396 ZZZ3-203ENST00000414381 561 ntTSL 420.14■□□□□ 0.812e-6■■□□□ 13.7
RPS3P23396 ZZZ3-206ENST00000463166 587 ntTSL 218.84■□□□□ 0.612e-6■■□□□ 13.7
RPS3P23396 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.94■□□□□ 0.462e-6■■□□□ 13.7
RPS3P23396 ZZZ3-205ENST00000458763 420 ntTSL 39.2□□□□□ -0.942e-6■■□□□ 13.7
RPS3P23396 ZZZ3-204ENST00000433749 603 ntTSL 44.9□□□□□ -1.632e-6■■□□□ 13.7
RPS3P23396 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.692e-6■■□□□ 13.7
RPS3P23396 ZZZ3-207ENST00000469944 686 ntTSL 33.48□□□□□ -1.852e-6■■□□□ 13.7
RPS3P23396 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.49□□□□□ -0.256e-9■■□□□ 13.7
RPS3P23396 AHCY-202ENST00000468908 675 ntTSL 513.45□□□□□ -0.261e-9■■□□□ 13.7
RPS3P23396 TMED5-201ENST00000370280 750 ntTSL 2 BASIC7.79□□□□□ -1.161e-8■■□□□ 13.7
RPS3P23396 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.544e-7■■□□□ 13.7
RPS3P23396 ACSL5-206ENST00000467340 588 ntTSL 27.33□□□□□ -1.246e-7■■□□□ 13.7
RPS3P23396 LMAN1-204ENST00000587940 442 ntTSL 23.09□□□□□ -1.911e-10■■□□□ 13.7
RPS3P23396 RBM14-RBM4-202ENST00000421355 2034 ntTSL 218.74■□□□□ 0.591e-11■■□□□ 13.7
RPS3P23396 ANXA6-209ENST00000520054 487 ntTSL 310.46□□□□□ -0.734e-6■■□□□ 13.7
RPS3P23396 KRT8-210ENST00000548998 918 ntTSL 517.79■□□□□ 0.445e-7■■□□□ 13.7
RPS3P23396 PFKL-210ENST00000496824 1063 ntTSL 518.72■□□□□ 0.591e-7■■□□□ 13.7
RPS3P23396 EIF3E-208ENST00000519517 726 ntTSL 30.81□□□□□ -2.289e-7■■□□□ 13.7
RPS3P23396 EIF3E-214ENST00000522352 611 ntTSL 30.8□□□□□ -2.289e-7■■□□□ 13.7
RPS3P23396 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC10.97□□□□□ -0.652e-7■■□□□ 13.6
RPS3P23396 CFB-284ENST00000498317 589 ntTSL 28.24□□□□□ -1.092e-6■■□□□ 13.6
RPS3P23396 ACTG1-209ENST00000575659 742 ntTSL 316.21■□□□□ 0.197e-25■■□□□ 13.6
RPS3P23396 ACTG1-211ENST00000575994 856 ntTSL 312.47□□□□□ -0.417e-25■■□□□ 13.6
RPS3P23396 ITIH3-208ENST00000475931 558 ntTSL 315.32■□□□□ 0.042e-14■■□□□ 13.6
RPS3P23396 SDHA-210ENST00000509420 580 ntTSL 212.84□□□□□ -0.354e-11■■□□□ 13.6
RPS3P23396 FUS-209ENST00000566605 1787 ntTSL 1 (best)25.72■■□□□ 1.716e-19■■□□□ 13.6
RPS3P23396 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.56e-19■■□□□ 13.6
RPS3P23396 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.126e-19■■□□□ 13.6
RPS3P23396 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -06e-19■■□□□ 13.6
RPS3P23396 FUS-206ENST00000487509 4920 ntTSL 213.37□□□□□ -0.276e-19■■□□□ 13.6
RPS3P23396 ACTG1-213ENST00000576214 1024 ntTSL 512.09□□□□□ -0.477e-25■■□□□ 13.6
RPS3P23396 CCT5-209ENST00000511700 582 ntTSL 312.84□□□□□ -0.356e-14■■□□□ 13.6
RPS3P23396 CCT5-204ENST00000503454 762 ntTSL 38.19□□□□□ -1.16e-14■■□□□ 13.6
RPS3P23396 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.74□□□□□ -1.656e-14■■□□□ 13.6
RPS3P23396 STXBP2-208ENST00000595800 1974 ntTSL 220.48■□□□□ 0.872e-7■■□□□ 13.6
RPS3P23396 STXBP2-220ENST00000601061 706 ntTSL 319.72■□□□□ 0.752e-7■■□□□ 13.6
RPS3P23396 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.61■□□□□ 0.572e-7■■□□□ 13.6
RPS3P23396 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.492e-7■■□□□ 13.6
RPS3P23396 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.442e-7■■□□□ 13.6
RPS3P23396 STXBP2-211ENST00000597068 1785 ntTSL 1 (best)14.79□□□□□ -0.042e-7■■□□□ 13.6
RPS3P23396 STXBP2-217ENST00000599737 1523 ntTSL 514.45□□□□□ -0.12e-7■■□□□ 13.6
RPS3P23396 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.44□□□□□ -0.12e-7■■□□□ 13.6
RPS3P23396 STXBP2-213ENST00000599278 295 ntTSL 314.16□□□□□ -0.142e-7■■□□□ 13.6
RPS3P23396 STXBP2-214ENST00000599400 811 ntTSL 513.86□□□□□ -0.192e-7■■□□□ 13.6
RPS3P23396 STXBP2-219ENST00000600702 770 ntTSL 211.94□□□□□ -0.52e-7■■□□□ 13.6
RPS3P23396 FUS-212ENST00000569760 639 ntTSL 222.64■■□□□ 1.213e-19■■□□□ 13.6
RPS3P23396 MYL6-204ENST00000546630 544 ntTSL 1 (best)14.48□□□□□ -0.093e-8■■□□□ 13.6
RPS3P23396 MYL6B-203ENST00000548571 223 ntTSL 48.41□□□□□ -1.063e-8■■□□□ 13.6
RPS3P23396 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.689e-8■■□□□ 13.6
RPS3P23396 EFNA1-203ENST00000469878 1288 ntTSL 312.96□□□□□ -0.339e-8■■□□□ 13.6
RPS3P23396 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC12.45□□□□□ -0.429e-8■■□□□ 13.6
RPS3P23396 MVD-209ENST00000565149 2352 ntTSL 1 (best)18.54■□□□□ 0.569e-9■■□□□ 13.6
RPS3P23396 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.68■□□□□ 0.421e-9■■□□□ 13.6
RPS3P23396 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.76■□□□□ 0.111e-9■■□□□ 13.6
RPS3P23396 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.371e-9■■□□□ 13.6
RPS3P23396 PRAME-212ENST00000485532 709 ntTSL 312.05□□□□□ -0.483e-32■■□□□ 13.6
RPS3P23396 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.24■■□□□ 1.632e-9■■□□□ 13.6
RPS3P23396 PCK2-215ENST00000561050 1856 ntTSL 218.82■□□□□ 0.62e-9■■□□□ 13.6
RPS3P23396 PCK2-206ENST00000558674 2189 ntTSL 218.11■□□□□ 0.492e-9■■□□□ 13.6
RPS3P23396 ACSM3-202ENST00000440284 1517 ntTSL 1 (best) BASIC10.19□□□□□ -0.783e-8■■□□□ 13.6
RPS3P23396 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.893e-6■■□□□ 13.6
RPS3P23396 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.83e-6■■□□□ 13.6
RPS3P23396 FAM207A-203ENST00000458015 643 ntTSL 519.59■□□□□ 0.733e-6■■□□□ 13.6
RPS3P23396 FAM207A-204ENST00000479127 759 ntTSL 318.91■□□□□ 0.623e-6■■□□□ 13.6
RPS3P23396 PECR-202ENST00000442122 1100 ntTSL 213.44□□□□□ -0.269e-7■■□□□ 13.6
RPS3P23396 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.39e-7■■□□□ 13.6
RPS3P23396 PYGB-201ENST00000216962 4134 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.861e-7■■□□□ 13.6
RPS3P23396 MARS-232ENST00000553162 575 ntTSL 219.3■□□□□ 0.687e-9■■□□□ 13.6
RPS3P23396 RACK1-230ENST00000513060 1651 ntTSL 513.49□□□□□ -0.252e-11■■□□□ 13.6
Retrieved 100 of 24,271 protein–RNA pairs in 214.8 ms