Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RN7SL606P-201ENST00000472779 293 ntBASIC14.63□□□□□ -0.07
RAB3BP20337 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.63□□□□□ -0.07
RAB3BP20337 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 AC011840.4-201ENST00000578471 627 ntBASIC14.63□□□□□ -0.07
RAB3BP20337 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3BP20337 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3BP20337 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3BP20337 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3BP20337 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 AC097637.2-201ENST00000624096 1997 ntBASIC14.62□□□□□ -0.07
RAB3BP20337 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB3BP20337 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.62□□□□□ -0.07
RAB3BP20337 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 AC009533.2-201ENST00000543664 586 ntBASIC14.62□□□□□ -0.07
RAB3BP20337 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.62□□□□□ -0.07
RAB3BP20337 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 AL592071.1-201ENST00000611956 408 ntBASIC14.62□□□□□ -0.07
RAB3BP20337 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.62□□□□□ -0.07
RAB3BP20337 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RAB3BP20337 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.62□□□□□ -0.07
RAB3BP20337 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RAB3BP20337 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RAB3BP20337 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 AL671710.1-201ENST00000610245 2349 ntBASIC14.61□□□□□ -0.07
RAB3BP20337 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3BP20337 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3BP20337 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RAB3BP20337 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3BP20337 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RAB3BP20337 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3BP20337 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.61□□□□□ -0.07
RAB3BP20337 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RAB3BP20337 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.61□□□□□ -0.07
RAB3BP20337 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.61□□□□□ -0.07
RAB3BP20337 NUS1P1-201ENST00000446295 882 ntBASIC14.61□□□□□ -0.07
RAB3BP20337 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RAB3BP20337 YBX1P2-201ENST00000489612 999 ntBASIC14.61□□□□□ -0.07
RAB3BP20337 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.61□□□□□ -0.07
RAB3BP20337 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.61□□□□□ -0.07
RAB3BP20337 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms