Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC140113.2-201ENST00000604370 208 ntBASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AC020765.3-201ENST00000613051 740 ntBASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AC004877.2-201ENST00000623941 599 ntBASIC16.78■□□□□ 0.28
HLA-DPA1P20036 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 ME2P1-201ENST00000426028 1970 ntBASIC16.78■□□□□ 0.28
HLA-DPA1P20036 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AC025580.3-201ENST00000617932 1424 ntBASIC16.78■□□□□ 0.28
HLA-DPA1P20036 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DPA1P20036 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 KRT18P3-201ENST00000451602 1288 ntBASIC16.77■□□□□ 0.28
HLA-DPA1P20036 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 AC109635.5-201ENST00000533593 962 ntBASIC16.77■□□□□ 0.28
HLA-DPA1P20036 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 KRT19P2-202ENST00000557173 1012 ntBASIC16.77■□□□□ 0.28
HLA-DPA1P20036 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.77■□□□□ 0.28
HLA-DPA1P20036 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DPA1P20036 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DPA1P20036 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HLA-DPA1P20036 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.77■□□□□ 0.27
HLA-DPA1P20036 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
HLA-DPA1P20036 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HLA-DPA1P20036 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.77■□□□□ 0.27
HLA-DPA1P20036 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 AC124067.4-201ENST00000519691 2379 ntBASIC16.76■□□□□ 0.27
HLA-DPA1P20036 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HLA-DPA1P20036 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HLA-DPA1P20036 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms