Protein–RNA interactions for Protein: P0DP42

TMEM225B, Transmembrane protein 225B, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM225BP0DP42 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM225BP0DP42 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TMEM225BP0DP42 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM225BP0DP42 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TMEM225BP0DP42 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM225BP0DP42 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM225BP0DP42 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TMEM225BP0DP42 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 AC005052.1-201ENST00000625181 2492 ntBASIC14.38□□□□□ -0.11
TMEM225BP0DP42 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 TOP3BP1-201ENST00000420768 1380 ntBASIC14.38□□□□□ -0.11
TMEM225BP0DP42 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 AC139887.3-201ENST00000568585 713 ntBASIC14.38□□□□□ -0.11
TMEM225BP0DP42 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 MIR3652-201ENST00000579335 131 ntBASIC14.38□□□□□ -0.11
TMEM225BP0DP42 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 AL121772.3-201ENST00000610840 674 ntBASIC14.38□□□□□ -0.11
TMEM225BP0DP42 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.38□□□□□ -0.11
TMEM225BP0DP42 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.37□□□□□ -0.11
TMEM225BP0DP42 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TMEM225BP0DP42 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM225BP0DP42 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM225BP0DP42 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM225BP0DP42 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM225BP0DP42 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM225BP0DP42 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms