Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.9■□□□□ 0.78
CHGBP05060 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.9■□□□□ 0.78
CHGBP05060 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
CHGBP05060 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHGBP05060 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CHGBP05060 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHGBP05060 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHGBP05060 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.89■□□□□ 0.77
CHGBP05060 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.89■□□□□ 0.77
CHGBP05060 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.89■□□□□ 0.77
CHGBP05060 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.89■□□□□ 0.77
CHGBP05060 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CHGBP05060 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.89■□□□□ 0.77
CHGBP05060 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.89■□□□□ 0.77
CHGBP05060 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.89■□□□□ 0.77
CHGBP05060 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHGBP05060 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.89■□□□□ 0.77
CHGBP05060 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.89■□□□□ 0.77
CHGBP05060 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.89■□□□□ 0.77
CHGBP05060 AC004835.2-201ENST00000603762 682 ntBASIC19.89■□□□□ 0.77
CHGBP05060 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.89■□□□□ 0.77
CHGBP05060 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.89■□□□□ 0.77
CHGBP05060 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.89■□□□□ 0.77
CHGBP05060 PCGF3-213ENST00000620529 1899 ntBASIC19.89■□□□□ 0.77
CHGBP05060 AC093028.1-201ENST00000622998 982 ntBASIC19.89■□□□□ 0.77
CHGBP05060 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHGBP05060 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CHGBP05060 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.88■□□□□ 0.77
CHGBP05060 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 UXT-AS1-201ENST00000590504 1525 ntBASIC19.88■□□□□ 0.77
CHGBP05060 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 MIR346-201ENST00000362234 95 ntBASIC19.88■□□□□ 0.77
CHGBP05060 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.88■□□□□ 0.77
CHGBP05060 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHGBP05060 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 AC005237.2-201ENST00000434368 219 ntBASIC19.88■□□□□ 0.77
CHGBP05060 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.88■□□□□ 0.77
CHGBP05060 METTL21AP1-201ENST00000438852 635 ntBASIC19.88■□□□□ 0.77
CHGBP05060 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.88■□□□□ 0.77
CHGBP05060 FAM86C2P-203ENST00000528684 1004 ntBASIC19.88■□□□□ 0.77
CHGBP05060 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.88■□□□□ 0.77
CHGBP05060 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
CHGBP05060 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.88■□□□□ 0.77
CHGBP05060 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.88■□□□□ 0.77
CHGBP05060 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHGBP05060 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.88■□□□□ 0.77
CHGBP05060 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.88■□□□□ 0.77
CHGBP05060 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.88■□□□□ 0.77
CHGBP05060 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.88■□□□□ 0.77
CHGBP05060 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHGBP05060 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.87■□□□□ 0.77
CHGBP05060 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CHGBP05060 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CHGBP05060 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 KRT18P28-201ENST00000453838 1332 ntBASIC19.87■□□□□ 0.77
CHGBP05060 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHGBP05060 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHGBP05060 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHGBP05060 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.87■□□□□ 0.77
CHGBP05060 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHGBP05060 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms