Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MYCNP04198 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
MYCNP04198 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MYCNP04198 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MYCNP04198 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MYCNP04198 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.3■□□□□ 0.68
MYCNP04198 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.3■□□□□ 0.68
MYCNP04198 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
MYCNP04198 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 CROCCP3-202ENST00000420820 1947 ntBASIC19.3■□□□□ 0.68
MYCNP04198 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.3■□□□□ 0.68
MYCNP04198 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MYCNP04198 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.3■□□□□ 0.68
MYCNP04198 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.3■□□□□ 0.68
MYCNP04198 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.3■□□□□ 0.68
MYCNP04198 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC19.3■□□□□ 0.68
MYCNP04198 AC002558.1-201ENST00000488906 803 ntBASIC19.3■□□□□ 0.68
MYCNP04198 AC067863.1-201ENST00000494933 530 ntBASIC19.3■□□□□ 0.68
MYCNP04198 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.3■□□□□ 0.68
MYCNP04198 NREP-217ENST00000509025 987 ntTSL 3 BASIC19.3■□□□□ 0.68
MYCNP04198 KNTC1-206ENST00000534995 1065 ntTSL 2 BASIC19.3■□□□□ 0.68
MYCNP04198 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.3■□□□□ 0.68
MYCNP04198 AC087888.1-201ENST00000550884 1254 ntBASIC19.3■□□□□ 0.68
MYCNP04198 AC015818.2-201ENST00000563569 840 ntBASIC19.3■□□□□ 0.68
MYCNP04198 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.3■□□□□ 0.68
MYCNP04198 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.3■□□□□ 0.68
MYCNP04198 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MYCNP04198 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
MYCNP04198 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.3■□□□□ 0.68
MYCNP04198 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.3■□□□□ 0.68
MYCNP04198 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MYCNP04198 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
MYCNP04198 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.29■□□□□ 0.68
MYCNP04198 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.29■□□□□ 0.68
MYCNP04198 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
MYCNP04198 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.29■□□□□ 0.68
MYCNP04198 WIZP1-201ENST00000531444 2299 ntBASIC19.29■□□□□ 0.68
MYCNP04198 MIR943-201ENST00000401286 94 ntBASIC19.29■□□□□ 0.68
MYCNP04198 AL355306.1-201ENST00000415580 579 ntBASIC19.29■□□□□ 0.68
MYCNP04198 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.29■□□□□ 0.68
MYCNP04198 KRT18P32-201ENST00000424695 1287 ntBASIC19.29■□□□□ 0.68
MYCNP04198 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC19.29■□□□□ 0.68
MYCNP04198 SCAND3P1-201ENST00000439854 1060 ntBASIC19.29■□□□□ 0.68
MYCNP04198 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
MYCNP04198 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC19.29■□□□□ 0.68
MYCNP04198 WWOX-AS1-201ENST00000567099 443 ntTSL 5 BASIC19.29■□□□□ 0.68
MYCNP04198 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.29■□□□□ 0.68
MYCNP04198 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.29■□□□□ 0.68
MYCNP04198 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MYCNP04198 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.29■□□□□ 0.68
MYCNP04198 AJ011932.1-201ENST00000621707 465 ntBASIC19.29■□□□□ 0.68
MYCNP04198 AC009093.7-201ENST00000623853 1223 ntBASIC19.29■□□□□ 0.68
MYCNP04198 AF228730.6-201ENST00000641497 218 ntBASIC19.29■□□□□ 0.68
MYCNP04198 AC084121.3-201ENST00000641716 218 ntBASIC19.29■□□□□ 0.68
MYCNP04198 AC105233.6-201ENST00000642093 218 ntBASIC19.29■□□□□ 0.68
MYCNP04198 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
MYCNP04198 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 OR6D1P-203ENST00000641209 4860 ntBASIC19.29■□□□□ 0.68
MYCNP04198 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.29■□□□□ 0.68
MYCNP04198 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MYCNP04198 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
MYCNP04198 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.28■□□□□ 0.68
MYCNP04198 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.28■□□□□ 0.68
MYCNP04198 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MYCNP04198 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.28■□□□□ 0.68
MYCNP04198 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.28■□□□□ 0.68
MYCNP04198 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
MYCNP04198 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
MYCNP04198 AL050305.1-201ENST00000399993 1230 ntBASIC19.28■□□□□ 0.68
MYCNP04198 AC015922.1-201ENST00000421102 1152 ntBASIC19.28■□□□□ 0.68
MYCNP04198 AL354692.1-201ENST00000423044 315 ntBASIC19.28■□□□□ 0.68
MYCNP04198 ACTG1P4-201ENST00000425123 1122 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms