Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC1P02654 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC1P02654 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
APOC1P02654 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.77□□□□□ -0.04
APOC1P02654 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOC1P02654 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
APOC1P02654 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
APOC1P02654 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.77□□□□□ -0.05
APOC1P02654 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.77□□□□□ -0.05
APOC1P02654 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.77□□□□□ -0.05
APOC1P02654 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.77□□□□□ -0.05
APOC1P02654 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.77□□□□□ -0.05
APOC1P02654 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.77□□□□□ -0.05
APOC1P02654 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
APOC1P02654 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.77□□□□□ -0.05
APOC1P02654 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
APOC1P02654 AC006557.2-201ENST00000592985 1240 ntBASIC14.77□□□□□ -0.05
APOC1P02654 MTDHP4-201ENST00000600287 670 ntBASIC14.77□□□□□ -0.05
APOC1P02654 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 REXO1L6P-202ENST00000619970 1078 ntBASIC14.77□□□□□ -0.05
APOC1P02654 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
APOC1P02654 AC067930.6-201ENST00000623257 4947 ntBASIC14.77□□□□□ -0.05
APOC1P02654 RNF216P1-203ENST00000404404 2427 ntBASIC14.77□□□□□ -0.05
APOC1P02654 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.77□□□□□ -0.05
APOC1P02654 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.77□□□□□ -0.05
APOC1P02654 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.77□□□□□ -0.05
APOC1P02654 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 AL645728.1-201ENST00000366221 2101 ntBASIC14.77□□□□□ -0.05
APOC1P02654 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.77□□□□□ -0.05
APOC1P02654 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOC1P02654 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 LINC02228-204ENST00000642115 2962 ntBASIC14.76□□□□□ -0.05
APOC1P02654 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.76□□□□□ -0.05
APOC1P02654 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.76□□□□□ -0.05
APOC1P02654 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
APOC1P02654 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.76□□□□□ -0.05
APOC1P02654 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.76□□□□□ -0.05
APOC1P02654 SAPCD2P3-201ENST00000455031 850 ntBASIC14.76□□□□□ -0.05
APOC1P02654 FGFR3P6-201ENST00000457012 610 ntBASIC14.76□□□□□ -0.05
APOC1P02654 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.76□□□□□ -0.05
APOC1P02654 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.76□□□□□ -0.05
APOC1P02654 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.76□□□□□ -0.05
APOC1P02654 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
APOC1P02654 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.76□□□□□ -0.05
APOC1P02654 AC004706.3-202ENST00000621574 984 ntBASIC14.76□□□□□ -0.05
APOC1P02654 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.76□□□□□ -0.05
APOC1P02654 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
APOC1P02654 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
APOC1P02654 AC006538.1-201ENST00000567905 1585 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms