Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
COL1A1P02452 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COL1A1P02452 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 U91328.1-201ENST00000437528 223 ntBASIC19.78■□□□□ 0.76
COL1A1P02452 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.78■□□□□ 0.76
COL1A1P02452 ATP5G2P4-201ENST00000442175 420 ntBASIC19.78■□□□□ 0.76
COL1A1P02452 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.78■□□□□ 0.76
COL1A1P02452 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.78■□□□□ 0.76
COL1A1P02452 TP53TG3HP-202ENST00000569755 579 ntBASIC19.78■□□□□ 0.76
COL1A1P02452 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.78■□□□□ 0.76
COL1A1P02452 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.78■□□□□ 0.76
COL1A1P02452 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.78■□□□□ 0.76
COL1A1P02452 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.78■□□□□ 0.76
COL1A1P02452 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.78■□□□□ 0.76
COL1A1P02452 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.78■□□□□ 0.76
COL1A1P02452 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.78■□□□□ 0.76
COL1A1P02452 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL1A1P02452 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.78■□□□□ 0.76
COL1A1P02452 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.77■□□□□ 0.76
COL1A1P02452 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 AC092171.3-201ENST00000610122 2651 ntBASIC19.77■□□□□ 0.76
COL1A1P02452 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
COL1A1P02452 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL1A1P02452 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL1A1P02452 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.77■□□□□ 0.76
COL1A1P02452 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
COL1A1P02452 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL1A1P02452 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A1P02452 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
COL1A1P02452 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.77■□□□□ 0.76
COL1A1P02452 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL1A1P02452 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
COL1A1P02452 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.76■□□□□ 0.75
COL1A1P02452 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.76■□□□□ 0.75
COL1A1P02452 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
COL1A1P02452 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.76■□□□□ 0.75
COL1A1P02452 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.76■□□□□ 0.75
COL1A1P02452 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.76■□□□□ 0.75
COL1A1P02452 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COL1A1P02452 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.76■□□□□ 0.75
COL1A1P02452 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL1A1P02452 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
COL1A1P02452 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COL1A1P02452 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.75■□□□□ 0.75
COL1A1P02452 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.75■□□□□ 0.75
COL1A1P02452 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.75■□□□□ 0.75
COL1A1P02452 GPR53P-205ENST00000457298 1084 ntBASIC19.75■□□□□ 0.75
COL1A1P02452 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.75■□□□□ 0.75
COL1A1P02452 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.75■□□□□ 0.75
COL1A1P02452 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.75■□□□□ 0.75
COL1A1P02452 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL1A1P02452 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL1A1P02452 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
COL1A1P02452 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms