Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SNX4O95219 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SNX4O95219 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.7■□□□□ 0.1
SNX4O95219 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.7■□□□□ 0.1
SNX4O95219 PRSS29P-201ENST00000440800 595 ntBASIC15.7■□□□□ 0.1
SNX4O95219 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX4O95219 TERC-201ENST00000602385 541 ntBASIC15.7■□□□□ 0.1
SNX4O95219 FAM197Y3-203ENST00000618346 717 ntBASIC15.7■□□□□ 0.1
SNX4O95219 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 PI4KAP1-204ENST00000612579 1703 ntBASIC15.7■□□□□ 0.1
SNX4O95219 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX4O95219 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.7■□□□□ 0.1
SNX4O95219 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX4O95219 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SNX4O95219 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX4O95219 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX4O95219 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SNX4O95219 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SNX4O95219 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX4O95219 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX4O95219 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SNX4O95219 MRPL20P1-201ENST00000400819 433 ntBASIC15.69■□□□□ 0.1
SNX4O95219 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SNX4O95219 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.69■□□□□ 0.1
SNX4O95219 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX4O95219 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX4O95219 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.69■□□□□ 0.1
SNX4O95219 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNX4O95219 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.69■□□□□ 0.1
SNX4O95219 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 AC060834.1-201ENST00000443027 2032 ntBASIC15.68■□□□□ 0.1
SNX4O95219 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNX4O95219 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNX4O95219 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SNX4O95219 AC108073.2-201ENST00000464002 357 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms