Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RTN3O95197 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.52■□□□□ 0.4
RTN3O95197 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.52■□□□□ 0.4
RTN3O95197 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.52■□□□□ 0.4
RTN3O95197 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.52■□□□□ 0.4
RTN3O95197 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
RTN3O95197 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.52■□□□□ 0.4
RTN3O95197 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.52■□□□□ 0.4
RTN3O95197 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.52■□□□□ 0.4
RTN3O95197 AC005237.2-201ENST00000434368 219 ntBASIC17.52■□□□□ 0.4
RTN3O95197 AC023141.5-201ENST00000458585 616 ntBASIC17.52■□□□□ 0.4
RTN3O95197 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.52■□□□□ 0.4
RTN3O95197 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.52■□□□□ 0.4
RTN3O95197 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RTN3O95197 AL139011.1-202ENST00000642063 584 ntBASIC17.52■□□□□ 0.4
RTN3O95197 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RTN3O95197 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.52■□□□□ 0.39
RTN3O95197 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 AC060834.1-201ENST00000443027 2032 ntBASIC17.52■□□□□ 0.39
RTN3O95197 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
RTN3O95197 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.52■□□□□ 0.39
RTN3O95197 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RTN3O95197 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
RTN3O95197 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.51■□□□□ 0.39
RTN3O95197 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RTN3O95197 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 KRT8P39-201ENST00000396270 1433 ntBASIC17.51■□□□□ 0.39
RTN3O95197 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 AL627223.1-201ENST00000416693 442 ntBASIC17.51■□□□□ 0.39
RTN3O95197 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.51■□□□□ 0.39
RTN3O95197 TSEN15P1-201ENST00000423257 515 ntBASIC17.51■□□□□ 0.39
RTN3O95197 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.51■□□□□ 0.39
RTN3O95197 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 IGHV3-62-201ENST00000520057 340 ntBASIC17.51■□□□□ 0.39
RTN3O95197 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
RTN3O95197 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.51■□□□□ 0.39
RTN3O95197 KRT8P23-201ENST00000560090 1207 ntBASIC17.51■□□□□ 0.39
RTN3O95197 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.51■□□□□ 0.39
RTN3O95197 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
RTN3O95197 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RTN3O95197 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
RTN3O95197 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RTN3O95197 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
RTN3O95197 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 AL391256.1-201ENST00000443260 1855 ntBASIC17.5■□□□□ 0.39
RTN3O95197 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTN3O95197 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RTN3O95197 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms