Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.64■■□□□ 1.06
LTN1O94822 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
LTN1O94822 KRT223P-202ENST00000449164 1292 ntBASIC21.64■■□□□ 1.06
LTN1O94822 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.64■■□□□ 1.06
LTN1O94822 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.64■■□□□ 1.06
LTN1O94822 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC21.64■■□□□ 1.06
LTN1O94822 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.06
LTN1O94822 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC21.64■■□□□ 1.06
LTN1O94822 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LTN1O94822 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.64■■□□□ 1.05
LTN1O94822 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LTN1O94822 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.64■■□□□ 1.05
LTN1O94822 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LTN1O94822 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LTN1O94822 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.64■■□□□ 1.05
LTN1O94822 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LTN1O94822 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.64■■□□□ 1.05
LTN1O94822 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LTN1O94822 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LTN1O94822 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.64■■□□□ 1.05
LTN1O94822 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC21.64■■□□□ 1.05
LTN1O94822 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
LTN1O94822 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LTN1O94822 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.63■■□□□ 1.05
LTN1O94822 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.63■■□□□ 1.05
LTN1O94822 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LTN1O94822 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LTN1O94822 AC011495.1-201ENST00000498085 584 ntBASIC21.63■■□□□ 1.05
LTN1O94822 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.63■■□□□ 1.05
LTN1O94822 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC21.63■■□□□ 1.05
LTN1O94822 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.63■■□□□ 1.05
LTN1O94822 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC21.63■■□□□ 1.05
LTN1O94822 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LTN1O94822 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.63■■□□□ 1.05
LTN1O94822 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
LTN1O94822 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
LTN1O94822 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LTN1O94822 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LTN1O94822 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LTN1O94822 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.62■■□□□ 1.05
LTN1O94822 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.62■■□□□ 1.05
LTN1O94822 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.62■■□□□ 1.05
LTN1O94822 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
LTN1O94822 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC21.62■■□□□ 1.05
LTN1O94822 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.62■■□□□ 1.05
LTN1O94822 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
LTN1O94822 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC21.62■■□□□ 1.05
LTN1O94822 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.62■■□□□ 1.05
LTN1O94822 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
LTN1O94822 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LTN1O94822 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC21.62■■□□□ 1.05
LTN1O94822 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LTN1O94822 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
LTN1O94822 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC21.61■■□□□ 1.05
LTN1O94822 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.61■■□□□ 1.05
LTN1O94822 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.61■■□□□ 1.05
LTN1O94822 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LTN1O94822 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
LTN1O94822 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC21.61■■□□□ 1.05
LTN1O94822 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LTN1O94822 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.61■■□□□ 1.05
LTN1O94822 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.61■■□□□ 1.05
LTN1O94822 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.61■■□□□ 1.05
LTN1O94822 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
LTN1O94822 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.61■■□□□ 1.05
LTN1O94822 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC21.61■■□□□ 1.05
LTN1O94822 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC21.61■■□□□ 1.05
LTN1O94822 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
LTN1O94822 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
LTN1O94822 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
LTN1O94822 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.61■■□□□ 1.05
LTN1O94822 PCDHB18P-201ENST00000524813 2368 ntBASIC21.61■■□□□ 1.05
LTN1O94822 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
LTN1O94822 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LTN1O94822 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
LTN1O94822 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.6■■□□□ 1.05
LTN1O94822 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.6■■□□□ 1.05
LTN1O94822 AC018470.1-201ENST00000624790 3129 ntBASIC21.6■■□□□ 1.05
LTN1O94822 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.6■■□□□ 1.05
LTN1O94822 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
LTN1O94822 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
LTN1O94822 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.6■■□□□ 1.05
LTN1O94822 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.6■■□□□ 1.05
LTN1O94822 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.6■■□□□ 1.05
LTN1O94822 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
LTN1O94822 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LTN1O94822 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.6■■□□□ 1.05
LTN1O94822 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.59■■□□□ 1.05
LTN1O94822 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LTN1O94822 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LTN1O94822 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms