Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UPK1BO75841 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
UPK1BO75841 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 AL135999.2-201ENST00000622438 1686 ntBASIC14.5□□□□□ -0.09
UPK1BO75841 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.5□□□□□ -0.09
UPK1BO75841 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 AL353807.1-201ENST00000427475 662 ntBASIC14.5□□□□□ -0.09
UPK1BO75841 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.5□□□□□ -0.09
UPK1BO75841 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.5□□□□□ -0.09
UPK1BO75841 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.5□□□□□ -0.09
UPK1BO75841 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.5□□□□□ -0.09
UPK1BO75841 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.5□□□□□ -0.09
UPK1BO75841 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
UPK1BO75841 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
UPK1BO75841 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.49□□□□□ -0.09
UPK1BO75841 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
UPK1BO75841 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.49□□□□□ -0.09
UPK1BO75841 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.49□□□□□ -0.09
UPK1BO75841 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.49□□□□□ -0.09
UPK1BO75841 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UPK1BO75841 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
UPK1BO75841 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
UPK1BO75841 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
UPK1BO75841 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
UPK1BO75841 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 AL161772.1-201ENST00000610494 4412 ntBASIC14.48□□□□□ -0.09
UPK1BO75841 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
UPK1BO75841 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 AL021920.2-201ENST00000624828 1351 ntBASIC14.48□□□□□ -0.09
UPK1BO75841 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
UPK1BO75841 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
UPK1BO75841 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms