Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.58■□□□□ 0.89
SRGAP3O43295 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRGAP3O43295 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SRGAP3O43295 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.58■□□□□ 0.89
SRGAP3O43295 AC079781.4-201ENST00000641908 219 ntBASIC20.58■□□□□ 0.89
SRGAP3O43295 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SRGAP3O43295 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
SRGAP3O43295 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRGAP3O43295 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.58■□□□□ 0.88
SRGAP3O43295 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.58■□□□□ 0.88
SRGAP3O43295 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SRGAP3O43295 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SRGAP3O43295 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SRGAP3O43295 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRGAP3O43295 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRGAP3O43295 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.58■□□□□ 0.88
SRGAP3O43295 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 AC073439.1-201ENST00000624121 1774 ntBASIC20.57■□□□□ 0.88
SRGAP3O43295 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.57■□□□□ 0.88
SRGAP3O43295 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 AC069335.1-201ENST00000489972 472 ntBASIC20.57■□□□□ 0.88
SRGAP3O43295 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 AC093520.2-201ENST00000561830 333 ntBASIC20.57■□□□□ 0.88
SRGAP3O43295 AC004835.2-201ENST00000603762 682 ntBASIC20.57■□□□□ 0.88
SRGAP3O43295 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRGAP3O43295 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SRGAP3O43295 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.57■□□□□ 0.88
SRGAP3O43295 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SRGAP3O43295 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.56■□□□□ 0.88
SRGAP3O43295 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SRGAP3O43295 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.56■□□□□ 0.88
SRGAP3O43295 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.56■□□□□ 0.88
SRGAP3O43295 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SRGAP3O43295 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.56■□□□□ 0.88
SRGAP3O43295 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.56■□□□□ 0.88
SRGAP3O43295 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.56■□□□□ 0.88
SRGAP3O43295 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
SRGAP3O43295 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.56■□□□□ 0.88
SRGAP3O43295 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.56■□□□□ 0.88
SRGAP3O43295 AC027307.2-201ENST00000591252 911 ntBASIC20.56■□□□□ 0.88
SRGAP3O43295 AC027612.4-201ENST00000605371 583 ntBASIC20.56■□□□□ 0.88
SRGAP3O43295 AC008267.7-201ENST00000624570 1194 ntBASIC20.56■□□□□ 0.88
SRGAP3O43295 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SRGAP3O43295 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.56■□□□□ 0.88
SRGAP3O43295 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SRGAP3O43295 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SRGAP3O43295 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRGAP3O43295 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SRGAP3O43295 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.55■□□□□ 0.88
SRGAP3O43295 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
SRGAP3O43295 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.55■□□□□ 0.88
SRGAP3O43295 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRGAP3O43295 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms