Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CACNB4O00305 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CACNB4O00305 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CACNB4O00305 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CACNB4O00305 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.39■□□□□ 0.21
CACNB4O00305 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.39■□□□□ 0.21
CACNB4O00305 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CACNB4O00305 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CACNB4O00305 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CACNB4O00305 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.39■□□□□ 0.21
CACNB4O00305 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.39■□□□□ 0.21
CACNB4O00305 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.39■□□□□ 0.21
CACNB4O00305 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.39■□□□□ 0.21
CACNB4O00305 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.39■□□□□ 0.21
CACNB4O00305 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.39■□□□□ 0.21
CACNB4O00305 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.39■□□□□ 0.21
CACNB4O00305 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.39■□□□□ 0.21
CACNB4O00305 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 AP001059.3-201ENST00000619053 235 ntBASIC16.39■□□□□ 0.21
CACNB4O00305 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CACNB4O00305 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CACNB4O00305 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.39■□□□□ 0.21
CACNB4O00305 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CACNB4O00305 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.38■□□□□ 0.21
CACNB4O00305 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.38■□□□□ 0.21
CACNB4O00305 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.38■□□□□ 0.21
CACNB4O00305 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.38■□□□□ 0.21
CACNB4O00305 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.38■□□□□ 0.21
CACNB4O00305 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CACNB4O00305 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 MIR346-201ENST00000362234 95 ntBASIC16.38■□□□□ 0.21
CACNB4O00305 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.38■□□□□ 0.21
CACNB4O00305 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.38■□□□□ 0.21
CACNB4O00305 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 SPDYE7P-202ENST00000420373 878 ntBASIC16.38■□□□□ 0.21
CACNB4O00305 HMGN1P19-201ENST00000436976 333 ntBASIC16.38■□□□□ 0.21
CACNB4O00305 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.38■□□□□ 0.21
CACNB4O00305 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.38■□□□□ 0.21
CACNB4O00305 PRYP6-201ENST00000514804 343 ntBASIC16.38■□□□□ 0.21
CACNB4O00305 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.38■□□□□ 0.21
CACNB4O00305 AL512356.2-201ENST00000546955 174 ntBASIC16.38■□□□□ 0.21
CACNB4O00305 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.38■□□□□ 0.21
CACNB4O00305 Z92544.3-201ENST00000624747 417 ntBASIC16.38■□□□□ 0.21
CACNB4O00305 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CACNB4O00305 PCDHA12-202ENST00000613593 2588 ntBASIC16.38■□□□□ 0.21
CACNB4O00305 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CACNB4O00305 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 AL645728.1-201ENST00000366221 2101 ntBASIC16.37■□□□□ 0.21
CACNB4O00305 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.37■□□□□ 0.21
CACNB4O00305 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.37■□□□□ 0.21
CACNB4O00305 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.37■□□□□ 0.21
CACNB4O00305 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CACNB4O00305 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.37■□□□□ 0.21
CACNB4O00305 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CACNB4O00305 SNX33P1-201ENST00000592116 1762 ntBASIC16.37■□□□□ 0.21
CACNB4O00305 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms