Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC026748.1-201ENST00000624349 3251 ntBASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 LINC01101-201ENST00000622953 1884 ntBASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 LINC00895-201ENST00000629028 1637 ntBASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TMBIM7P-203ENST00000641617 1718 ntBASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SNX18-202ENST00000343017 3140 ntBASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC10.55□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AL021920.2-201ENST00000624828 1351 ntBASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
TMEM256-PLSCR3K7ERE1 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms