Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
MBD3L3A6NE82 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 AC005915.1-201ENST00000624912 2018 ntBASIC14.49□□□□□ -0.09
MBD3L3A6NE82 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 RPL37AP1-201ENST00000412502 279 ntBASIC14.49□□□□□ -0.09
MBD3L3A6NE82 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 AL079307.3-201ENST00000556114 283 ntBASIC14.49□□□□□ -0.09
MBD3L3A6NE82 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 AC026979.3-201ENST00000607315 403 ntBASIC14.49□□□□□ -0.09
MBD3L3A6NE82 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 LINC01144-201ENST00000626198 1710 ntBASIC14.49□□□□□ -0.09
MBD3L3A6NE82 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
MBD3L3A6NE82 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 AL080243.2-201ENST00000418783 582 ntBASIC14.48□□□□□ -0.09
MBD3L3A6NE82 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 AL844908.2-201ENST00000609461 460 ntBASIC14.48□□□□□ -0.09
MBD3L3A6NE82 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 GGT3P-204ENST00000453783 1664 ntBASIC14.48□□□□□ -0.09
MBD3L3A6NE82 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms