Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC090616.6-201ENST00000582640 721 ntBASIC14.51□□□□□ -0.09
SHISA3A0PJX4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 GPAA1P2-202ENST00000606848 1787 ntBASIC14.51□□□□□ -0.09
SHISA3A0PJX4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SHISA3A0PJX4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AC010654.1-201ENST00000615722 808 ntBASIC14.5□□□□□ -0.09
SHISA3A0PJX4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AP000867.4-201ENST00000641616 219 ntBASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SHISA3A0PJX4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 LINC01144-201ENST00000626198 1710 ntBASIC14.49□□□□□ -0.09
SHISA3A0PJX4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 AC023908.3-201ENST00000564211 3047 ntBASIC14.49□□□□□ -0.09
SHISA3A0PJX4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 RNF152P1-201ENST00000397754 604 ntBASIC14.49□□□□□ -0.09
SHISA3A0PJX4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 AL109954.1-202ENST00000564051 2148 ntBASIC14.49□□□□□ -0.09
SHISA3A0PJX4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SHISA3A0PJX4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms