Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 CICP16-201ENST00000502609 2813 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 BX664725.1-201ENST00000438252 379 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DUX4L2-201ENST00000561772 1275 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 SLC7A5P1-201ENST00000568957 537 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 MIR4508-201ENST00000584178 70 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 AC010997.5-201ENST00000609182 354 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DUX4L6-201ENST00000626483 1275 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DUX4L1-201ENST00000627662 1275 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DUX4L8-201ENST00000629013 1275 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DUX4L3-201ENST00000630187 1275 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DUX4L7-201ENST00000630678 1275 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DUX4L5-201ENST00000630834 1275 ntBASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LINC01558Q9Y6Z2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 AC005104.2-201ENST00000427818 678 ntBASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 KRT18P20-201ENST00000548986 1279 ntBASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
LINC01558Q9Y6Z2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms