Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 KRT126P-201ENST00000549467 1181 ntBASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 LINC02199-201ENST00000506655 2702 ntBASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CYP46A1Q9Y6A2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 PRSS29P-201ENST00000440800 595 ntBASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CYP46A1Q9Y6A2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 AC098831.1-202ENST00000438821 336 ntBASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 AC108751.1-201ENST00000490852 363 ntBASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 LINC01144-201ENST00000626198 1710 ntBASIC19.73■□□□□ 0.75
CYP46A1Q9Y6A2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CYP46A1Q9Y6A2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms