Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 TIMM8BP1-201ENST00000452384 211 ntBASIC17.26■□□□□ 0.35
RAD54BQ9Y620 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.26■□□□□ 0.35
RAD54BQ9Y620 AC022145.2-201ENST00000598203 171 ntBASIC17.26■□□□□ 0.35
RAD54BQ9Y620 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 SLC22A20-204ENST00000530038 1673 ntBASIC17.26■□□□□ 0.35
RAD54BQ9Y620 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAD54BQ9Y620 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 SNX33P1-201ENST00000592116 1762 ntBASIC17.25■□□□□ 0.35
RAD54BQ9Y620 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 AC004449.1-201ENST00000564240 433 ntBASIC17.25■□□□□ 0.35
RAD54BQ9Y620 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 CYP2A7P1-201ENST00000595391 815 ntBASIC17.25■□□□□ 0.35
RAD54BQ9Y620 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RAD54BQ9Y620 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAD54BQ9Y620 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms