Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGA6Q9Y5G7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 AL139400.1-201ENST00000366220 510 ntBASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 AC002056.1-201ENST00000395613 760 ntBASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 HLA-J-203ENST00000494367 1087 ntBASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGA6Q9Y5G7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 MIR770-201ENST00000390219 98 ntBASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 AC022145.2-201ENST00000598203 171 ntBASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 AL645728.2-201ENST00000641974 660 ntBASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 RNF216P1-203ENST00000404404 2427 ntBASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 LINC02012-201ENST00000608206 1725 ntBASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA6Q9Y5G7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 AC008741.2-201ENST00000612792 3115 ntBASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA6Q9Y5G7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms