Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL023806.1-201ENST00000603994 1649 ntBASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.2■□□□□ 0.66
CTDP1Q9Y5B0 FO538757.1-201ENST00000623083 1397 ntBASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 AC006277.1-201ENST00000624348 1610 ntBASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 LINC00895-201ENST00000629028 1637 ntBASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 AL390955.2-201ENST00000603032 514 ntBASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 AC003101.2-201ENST00000612557 442 ntBASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 AJ011932.1-201ENST00000621707 465 ntBASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTDP1Q9Y5B0 AC092068.3-201ENST00000587894 2016 ntBASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 PRYP6-201ENST00000514804 343 ntBASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 MIR4453-201ENST00000584019 89 ntBASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 AL390754.1-201ENST00000619088 582 ntBASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CTDP1Q9Y5B0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 AP002490.2-201ENST00000524791 560 ntBASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDP1Q9Y5B0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms