Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 AC009949.1-201ENST00000623048 1830 ntBASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
R3HCC1Q9Y3T6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AL450487.1-201ENST00000426799 995 ntBASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AC007967.3-201ENST00000434308 558 ntBASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 KRT18P31-201ENST00000506277 1292 ntBASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 KRT126P-201ENST00000549467 1181 ntBASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 MIR5100-201ENST00000579544 119 ntBASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 LINC01451-201ENST00000623792 534 ntBASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 AL009178.2-201ENST00000597278 2719 ntBASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.13■□□□□ 0.65
R3HCC1Q9Y3T6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 AC016396.2-201ENST00000562575 1417 ntBASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 TSPY19P-201ENST00000418461 509 ntBASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 TSPY18P-201ENST00000441642 509 ntBASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 AC011467.2-201ENST00000598425 242 ntBASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
R3HCC1Q9Y3T6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms