Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 TSPY20P-201ENST00000450910 630 ntBASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 AC140113.3-201ENST00000605663 199 ntBASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RCL1Q9Y2P8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 AC003669.1-201ENST00000334569 611 ntBASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 MIR718-201ENST00000390190 70 ntBASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 FAM220CP-201ENST00000395253 831 ntBASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 KLF4P1-201ENST00000412782 1185 ntBASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 AC002310.6-201ENST00000624451 1377 ntBASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RCL1Q9Y2P8 AL161772.1-201ENST00000610494 4412 ntBASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 AC132938.5-201ENST00000624980 1813 ntBASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.65□□□□□ -0.22
RCL1Q9Y2P8 STARP1-201ENST00000397973 869 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms