Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RPH3AQ9Y2J0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 AC105020.1-201ENST00000435356 2205 ntBASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 AC005915.1-201ENST00000624912 2018 ntBASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 TUBB8P12-201ENST00000308911 1335 ntBASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 TUBB7P-202ENST00000428444 1305 ntBASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 TUBB8P7-204ENST00000567960 1332 ntBASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 PDPK2P-202ENST00000562415 1191 ntBASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 AC005412.3-201ENST00000580309 715 ntBASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPH3AQ9Y2J0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 AC012569.1-201ENST00000591191 1524 ntBASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 AL353732.1-201ENST00000569618 1459 ntBASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 KRT18P28-201ENST00000453838 1332 ntBASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 AC004832.2-201ENST00000426397 482 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms