Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.37■□□□□ 0.05
NPIPA1Q9UND3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 NKILA-202ENST00000614771 2598 ntBASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 AC005915.1-201ENST00000624912 2018 ntBASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 AC140658.5-201ENST00000438532 169 ntBASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SPDYE11-202ENST00000450699 704 ntBASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 AC025678.2-201ENST00000562061 970 ntBASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SPDYE9P-201ENST00000570642 692 ntBASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SPDYE10P-202ENST00000612005 668 ntBASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SPDYE8P-202ENST00000612377 668 ntBASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
NPIPA1Q9UND3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AC092068.3-201ENST00000587894 2016 ntBASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AL355306.1-201ENST00000415580 579 ntBASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AC005237.2-201ENST00000434368 219 ntBASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 MIR4515-201ENST00000584082 81 ntBASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AC011467.4-201ENST00000594891 528 ntBASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AC093512.1-201ENST00000617969 520 ntBASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 LINC00628-201ENST00000628516 1289 ntBASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPIPA1Q9UND3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPIPA1Q9UND3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms