Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC105233.2-201ENST00000523697 349 ntBASIC17.72■□□□□ 0.43
SIX4Q9UIU6 AF228730.5-201ENST00000530288 346 ntBASIC17.72■□□□□ 0.43
SIX4Q9UIU6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SIX4Q9UIU6 HCG11-201ENST00000411553 5696 ntBASIC17.72■□□□□ 0.43
SIX4Q9UIU6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 KRT18P32-201ENST00000424695 1287 ntBASIC17.71■□□□□ 0.43
SIX4Q9UIU6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 LINC01144-201ENST00000626198 1710 ntBASIC17.71■□□□□ 0.43
SIX4Q9UIU6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 ME2P1-201ENST00000426028 1970 ntBASIC17.71■□□□□ 0.43
SIX4Q9UIU6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIX4Q9UIU6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
SIX4Q9UIU6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SIX4Q9UIU6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
SIX4Q9UIU6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 AC109322.1-201ENST00000524499 1264 ntBASIC17.7■□□□□ 0.42
SIX4Q9UIU6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 KRT18P28-201ENST00000453838 1332 ntBASIC17.7■□□□□ 0.42
SIX4Q9UIU6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIX4Q9UIU6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 TSEN15P1-201ENST00000423257 515 ntBASIC17.69■□□□□ 0.42
SIX4Q9UIU6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.69■□□□□ 0.42
SIX4Q9UIU6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms