Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.88■□□□□ 0.29
NCKIPSDQ9NZQ3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 AP002490.2-201ENST00000524791 560 ntBASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 AL596442.2-201ENST00000610240 980 ntBASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 AC092865.6-201ENST00000642101 219 ntBASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 ELL2P1-201ENST00000413990 1906 ntBASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NCKIPSDQ9NZQ3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 AC018845.2-201ENST00000568326 409 ntBASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 FER1L4-210ENST00000615531 5998 ntBASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NCKIPSDQ9NZQ3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 CNN2P11-201ENST00000429351 262 ntBASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.85■□□□□ 0.29
NCKIPSDQ9NZQ3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms