Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN4Q9NRR5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN4Q9NRR5 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 ME2P1-201ENST00000426028 1970 ntBASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AL022342.1-201ENST00000400363 863 ntBASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AC140658.5-201ENST00000438532 169 ntBASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 KRT18P58-201ENST00000527480 1120 ntBASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AC109635.5-201ENST00000533593 962 ntBASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 PDPK2P-202ENST00000562415 1191 ntBASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 ALOX12P2-203ENST00000570921 1945 ntBASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN4Q9NRR5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms