Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 MIR4492-201ENST00000581627 80 ntBASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 MPDU1-223ENST00000582151 728 ntBASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 AC064862.7-201ENST00000604520 867 ntBASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 HYMAI-201ENST00000635591 3347 ntBASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC42SE2Q9NRR3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 PAWRP1-201ENST00000451083 565 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 POU5F1P6-201ENST00000466990 990 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 MIR3180-1-201ENST00000580374 94 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 MIR3180-3-201ENST00000584616 94 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 AC099336.1-202ENST00000602961 463 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 AL022326.1-202ENST00000641533 845 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 IER3-202ENST00000376377 1350 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 AC011270.2-201ENST00000624293 2550 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 LINC01144-201ENST00000626198 1710 ntBASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CDC42SE2Q9NRR3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 AL596257.1-201ENST00000641463 2694 ntBASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC42SE2Q9NRR3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms