Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 AL512652.2-201ENST00000625156 1716 ntBASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC4Q9HBW1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 ELL2P1-201ENST00000413990 1906 ntBASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 HLA-A-202ENST00000376806 1854 ntBASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 MIR4469-201ENST00000583919 79 ntBASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 AC099522.2-201ENST00000607001 744 ntBASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRC4Q9HBW1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 NKILA-202ENST00000614771 2598 ntBASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AL671277.1-201ENST00000429656 993 ntBASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 UBALD1-205ENST00000590891 2641 ntBASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRC4Q9HBW1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRC4Q9HBW1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.52■□□□□ 0.39
LRRC4Q9HBW1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms