Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.58□□□□□ -0.07
CDH20Q9HBT6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.58□□□□□ -0.07
CDH20Q9HBT6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH20Q9HBT6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CDH20Q9HBT6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 RHOQP3-201ENST00000437982 621 ntBASIC14.58□□□□□ -0.08
CDH20Q9HBT6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 AL031432.2-201ENST00000566714 459 ntBASIC14.58□□□□□ -0.08
CDH20Q9HBT6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 AL928711.1-201ENST00000570165 459 ntBASIC14.58□□□□□ -0.08
CDH20Q9HBT6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.58□□□□□ -0.08
CDH20Q9HBT6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 PMS2P7-201ENST00000506558 1336 ntBASIC14.58□□□□□ -0.08
CDH20Q9HBT6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 AC006277.1-201ENST00000624348 1610 ntBASIC14.58□□□□□ -0.08
CDH20Q9HBT6 LINC00895-201ENST00000629028 1637 ntBASIC14.58□□□□□ -0.08
CDH20Q9HBT6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 AC008894.3-201ENST00000624324 3103 ntBASIC14.58□□□□□ -0.08
CDH20Q9HBT6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDH20Q9HBT6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 AC063926.3-201ENST00000624734 5658 ntBASIC14.57□□□□□ -0.08
CDH20Q9HBT6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.57□□□□□ -0.08
CDH20Q9HBT6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 KRT18P2-201ENST00000447938 1258 ntBASIC14.57□□□□□ -0.08
CDH20Q9HBT6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 AC040169.1-201ENST00000565382 521 ntBASIC14.57□□□□□ -0.08
CDH20Q9HBT6 CYP2A7P1-201ENST00000595391 815 ntBASIC14.57□□□□□ -0.08
CDH20Q9HBT6 AC013467.2-201ENST00000605472 835 ntBASIC14.57□□□□□ -0.08
CDH20Q9HBT6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 AC025580.3-201ENST00000617932 1424 ntBASIC14.57□□□□□ -0.08
CDH20Q9HBT6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CDH20Q9HBT6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CDH20Q9HBT6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms