Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 AC055748.1-201ENST00000489836 959 ntBASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 AC113404.2-201ENST00000507884 177 ntBASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 AC091812.2-201ENST00000619081 385 ntBASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC24.99■■□□□ 1.59
SCAF1Q9H7N4 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 AL355994.1-201ENST00000424379 260 ntBASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 UGT1A2P-201ENST00000454886 866 ntBASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 AL157762.1-201ENST00000619612 415 ntBASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 MIR6799-201ENST00000620297 69 ntBASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 AC105339.1-204ENST00000636249 355 ntBASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SCAF1Q9H7N4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 ATP5G2P4-201ENST00000442175 420 ntBASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 AC067863.1-201ENST00000494933 530 ntBASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 AC004790.2-201ENST00000623588 572 ntBASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
SCAF1Q9H7N4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 SETP12-201ENST00000514068 805 ntBASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SCAF1Q9H7N4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
SCAF1Q9H7N4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
SCAF1Q9H7N4 AC090340.1-201ENST00000620778 4980 ntBASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms