RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 AEBP2Q6ZN18 517 aaPredicted RBP36.61■■■■□ 3.45
AC055748.1-201ENST00000489836 CHIC1Q5VXU3 224 aa35.25■■■■□ 3.23
AC055748.1-201ENST00000489836 PHF23Q9BUL5 403 aaPredicted RBP31.02■■■□□ 2.56
AC055748.1-201ENST00000489836 SENP3Q9H4L4 574 aaPredicted RBP31■■■□□ 2.55
AC055748.1-201ENST00000489836 FOXD1Q16676 465 aa28.92■■■□□ 2.22
AC055748.1-201ENST00000489836 PLPPR3Q6T4P5 718 aa28.39■■■□□ 2.14
AC055748.1-201ENST00000489836 PPP6R1Q9UPN7 881 aa27.54■■■□□ 2
AC055748.1-201ENST00000489836 ADRA2BP18089 450 aa27.48■■□□□ 1.99
AC055748.1-201ENST00000489836 PIAS4Q8N2W9 510 aaPredicted RBP27.15■■□□□ 1.94
AC055748.1-201ENST00000489836 MSH5O43196 834 aa26.74■■□□□ 1.87
AC055748.1-201ENST00000489836 POTEDQ86YR6 584 aa25.21■■□□□ 1.63
AC055748.1-201ENST00000489836 MAPK8IP2Q13387 824 aaPredicted RBP25.09■■□□□ 1.61
AC055748.1-201ENST00000489836 PPP4R3CPQ6ZMV5 832 aa25.02■■□□□ 1.6
AC055748.1-201ENST00000489836 SCAF1Q9H7N4 1312 aaKnown RBP24.99■■□□□ 1.59
AC055748.1-201ENST00000489836 DMRT2Q9Y5R5 561 aa24.71■■□□□ 1.55
AC055748.1-201ENST00000489836 CNKSR2Q8WXI2 1034 aa24.36■■□□□ 1.49
AC055748.1-201ENST00000489836 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
AC055748.1-201ENST00000489836 NCBP3Q53F19 620 aaKnown RBP24.14■■□□□ 1.45
AC055748.1-201ENST00000489836 HOXD11P31277 338 aaPredicted RBP24.01■■□□□ 1.43
AC055748.1-201ENST00000489836 KCNA4P22459 653 aa23.99■■□□□ 1.43
AC055748.1-201ENST00000489836 RNF216Q9NWF9 866 aaPredicted RBP23.98■■□□□ 1.43
AC055748.1-201ENST00000489836 NPM3O75607 178 aaKnown RBP23.9■■□□□ 1.42
AC055748.1-201ENST00000489836 DCAF8L1A6NGE4 600 aa23.74■■□□□ 1.39
AC055748.1-201ENST00000489836 DNAJC5BQ9UF47 199 aa23.11■■□□□ 1.29
AC055748.1-201ENST00000489836 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.26
AC055748.1-201ENST00000489836 RNF39Q9H2S5 420 aa22.92■■□□□ 1.26
AC055748.1-201ENST00000489836 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
AC055748.1-201ENST00000489836 SLC4A2P04920 1241 aa22.69■■□□□ 1.22
AC055748.1-201ENST00000489836 CACNB1Q02641 598 aaPredicted RBP22.66■■□□□ 1.22
AC055748.1-201ENST00000489836 C1QBPQ07021 282 aaKnown RBP22.56■■□□□ 1.2
AC055748.1-201ENST00000489836 U3KPZ7 1027 aaPredicted RBP22.53■■□□□ 1.2
AC055748.1-201ENST00000489836 FOXD4L1Q9NU39 408 aa22.14■■□□□ 1.13
AC055748.1-201ENST00000489836 ZBTB22O15209 634 aa22.11■■□□□ 1.13
AC055748.1-201ENST00000489836 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
AC055748.1-201ENST00000489836 MYCNP04198 464 aaPredicted RBP22.03■■□□□ 1.12
AC055748.1-201ENST00000489836 CAPN15O75808 1086 aa21.96■■□□□ 1.11
AC055748.1-201ENST00000489836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.95■■□□□ 1.1
AC055748.1-201ENST00000489836 HNRNPUL2Q1KMD3 747 aaKnown RBP21.95■■□□□ 1.1
AC055748.1-201ENST00000489836 SAMD1Q6SPF0 538 aaPredicted RBP21.9■■□□□ 1.1
AC055748.1-201ENST00000489836 APLP2Q06481 763 aa21.8■■□□□ 1.08
AC055748.1-201ENST00000489836 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
AC055748.1-201ENST00000489836 DSG3P32926 999 aa21.68■■□□□ 1.06
AC055748.1-201ENST00000489836 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
AC055748.1-201ENST00000489836 ZNF219Q9P2Y4 722 aaPredicted RBP21.65■■□□□ 1.06
AC055748.1-201ENST00000489836 ATF5Q9Y2D1 282 aaPredicted RBP21.61■■□□□ 1.05
AC055748.1-201ENST00000489836 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
AC055748.1-201ENST00000489836 ABCB7O75027 752 aa21.57■■□□□ 1.04
AC055748.1-201ENST00000489836 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
AC055748.1-201ENST00000489836 ATXN8OSP0DMR3 200 aa21.33■■□□□ 1.01
AC055748.1-201ENST00000489836 POLA2Q14181 598 aa21.29■■□□□ 1
AC055748.1-201ENST00000489836 ABCC9O60706 1549 aa21.19■□□□□ 0.98
AC055748.1-201ENST00000489836 ZBTB12Q9Y330 459 aaPredicted RBP20.79■□□□□ 0.92
AC055748.1-201ENST00000489836 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
AC055748.1-201ENST00000489836 MKRN4PQ13434 485 aaPredicted RBP20.61■□□□□ 0.89
AC055748.1-201ENST00000489836 FBLN2P98095 1184 aa20.58■□□□□ 0.89
AC055748.1-201ENST00000489836 RBM42Q9BTD8 480 aaKnown RBP20.57■□□□□ 0.88
AC055748.1-201ENST00000489836 NACADO15069 1562 aa20.35■□□□□ 0.85
AC055748.1-201ENST00000489836 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
AC055748.1-201ENST00000489836 MYO15BQ96JP2 1530 aa20.27■□□□□ 0.83
AC055748.1-201ENST00000489836 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
AC055748.1-201ENST00000489836 AKT1S1Q96B36 256 aa20.26■□□□□ 0.83
AC055748.1-201ENST00000489836 SPDYE2BA6NHP3 402 aa20.24■□□□□ 0.83
AC055748.1-201ENST00000489836 SPDYE6P0CI01 402 aa20.24■□□□□ 0.83
AC055748.1-201ENST00000489836 SPDYE2Q495Y8 402 aa20.24■□□□□ 0.83
AC055748.1-201ENST00000489836 ZCCHC6Q5VYS8 1495 aaKnown RBP20.24■□□□□ 0.83
AC055748.1-201ENST00000489836 DCAF1Q9Y4B6 1507 aa20.14■□□□□ 0.81
AC055748.1-201ENST00000489836 ZNF692Q9BU19 519 aaPredicted RBP20.14■□□□□ 0.81
AC055748.1-201ENST00000489836 REM2Q8IYK8 340 aaPredicted RBP20.12■□□□□ 0.81
AC055748.1-201ENST00000489836 SSUH2Q9Y2M2 353 aa20.07■□□□□ 0.8
AC055748.1-201ENST00000489836 CHRDL2Q6WN34 429 aa19.97■□□□□ 0.79
AC055748.1-201ENST00000489836 PITPNM1O00562 1244 aa19.92■□□□□ 0.78
AC055748.1-201ENST00000489836 PABPN1Q86U42 306 aaKnown RBP eCLIP19.89■□□□□ 0.77
AC055748.1-201ENST00000489836 SPDYE4A6NLX3 237 aa19.88■□□□□ 0.77
AC055748.1-201ENST00000489836 POTEHQ6S545 545 aa19.86■□□□□ 0.77
AC055748.1-201ENST00000489836 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
AC055748.1-201ENST00000489836 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
AC055748.1-201ENST00000489836 CLEC11AQ9Y240 323 aa19.78■□□□□ 0.76
AC055748.1-201ENST00000489836 SPDYE1Q8NFV5 336 aaPredicted RBP19.75■□□□□ 0.75
AC055748.1-201ENST00000489836 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
AC055748.1-201ENST00000489836 PIP4P2Q8N4L2 257 aa19.65■□□□□ 0.74
AC055748.1-201ENST00000489836 FXR2P51116 673 aaKnown RBP eCLIP19.6■□□□□ 0.73
AC055748.1-201ENST00000489836 SHROOM4Q9ULL8 1493 aa19.59■□□□□ 0.73
AC055748.1-201ENST00000489836 FKBP8Q14318 412 aa19.53■□□□□ 0.72
AC055748.1-201ENST00000489836 PRR29P0C7W0 189 aa19.48■□□□□ 0.71
AC055748.1-201ENST00000489836 PROM2Q8N271 834 aa19.46■□□□□ 0.71
AC055748.1-201ENST00000489836 PRKAR2AP13861 404 aaKnown RBP19.41■□□□□ 0.7
AC055748.1-201ENST00000489836 CHADLQ6NUI6 762 aa19.39■□□□□ 0.69
AC055748.1-201ENST00000489836 STAG3Q9UJ98 1225 aa19.36■□□□□ 0.69
AC055748.1-201ENST00000489836 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
AC055748.1-201ENST00000489836 CREBZFQ9NS37 354 aa19.17■□□□□ 0.66
AC055748.1-201ENST00000489836 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
AC055748.1-201ENST00000489836 HAX1O00165 279 aa19.13■□□□□ 0.65
AC055748.1-201ENST00000489836 FARP1Q9Y4F1 1045 aaPredicted RBP19.07■□□□□ 0.64
AC055748.1-201ENST00000489836 CECR2Q9BXF3 1484 aa19.06■□□□□ 0.64
AC055748.1-201ENST00000489836 EVX2Q03828 476 aa19.01■□□□□ 0.63
AC055748.1-201ENST00000489836 C19orf67A6NJJ6 358 aa18.95■□□□□ 0.62
AC055748.1-201ENST00000489836 MNX1P50219 401 aaPredicted RBP18.92■□□□□ 0.62
AC055748.1-201ENST00000489836 MIER1Q8N108 512 aa18.91■□□□□ 0.62
AC055748.1-201ENST00000489836 SP7Q8TDD2 431 aaPredicted RBP18.87■□□□□ 0.61
AC055748.1-201ENST00000489836 FBXO3Q9UK99 471 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 233.2 ms