Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC079140.1-201ENST00000508039 487 ntBASIC19.58■□□□□ 0.72
RNF41Q9H4P4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 AL691403.2-201ENST00000618460 490 ntBASIC19.58■□□□□ 0.72
RNF41Q9H4P4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RNF41Q9H4P4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 LINC01144-201ENST00000626198 1710 ntBASIC19.57■□□□□ 0.72
RNF41Q9H4P4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 AC022145.2-201ENST00000598203 171 ntBASIC19.57■□□□□ 0.72
RNF41Q9H4P4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 GPALPP1-207ENST00000611650 899 ntBASIC19.57■□□□□ 0.72
RNF41Q9H4P4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF41Q9H4P4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 AC008267.7-201ENST00000624570 1194 ntBASIC19.56■□□□□ 0.72
RNF41Q9H4P4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF41Q9H4P4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 KRT8P23-201ENST00000560090 1207 ntBASIC19.55■□□□□ 0.72
RNF41Q9H4P4 SNHG9-202ENST00000564014 471 ntBASIC19.55■□□□□ 0.72
RNF41Q9H4P4 AC004835.2-201ENST00000603762 682 ntBASIC19.55■□□□□ 0.72
RNF41Q9H4P4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 AC009053.2-201ENST00000563701 2365 ntBASIC19.55■□□□□ 0.72
RNF41Q9H4P4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms