Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 AC002310.6-201ENST00000624451 1377 ntBASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 AC104771.1-201ENST00000603335 964 ntBASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 AC006486.2-201ENST00000624246 2199 ntBASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 AC116562.4-202ENST00000641738 218 ntBASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 AC139749.1-202ENST00000617529 3139 ntBASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 SSR4P1-203ENST00000599569 2260 ntBASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.11□□□□□ -0.15
SEC22CQ9BRL7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 AL359258.3-201ENST00000622910 2331 ntBASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SEC22CQ9BRL7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms