Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.33□□□□□ -0.28
RNF2Q99496 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.33□□□□□ -0.28
RNF2Q99496 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RNF2Q99496 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.33□□□□□ -0.28
RNF2Q99496 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.33□□□□□ -0.28
RNF2Q99496 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RNF2Q99496 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
RNF2Q99496 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.32□□□□□ -0.28
RNF2Q99496 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 AL391256.1-201ENST00000443260 1855 ntBASIC13.32□□□□□ -0.28
RNF2Q99496 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RNF2Q99496 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.32□□□□□ -0.28
RNF2Q99496 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.32□□□□□ -0.28
RNF2Q99496 RCN1P2-201ENST00000398357 915 ntBASIC13.32□□□□□ -0.28
RNF2Q99496 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 POM121L3P-201ENST00000419331 1163 ntBASIC13.32□□□□□ -0.28
RNF2Q99496 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.32□□□□□ -0.28
RNF2Q99496 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.32□□□□□ -0.28
RNF2Q99496 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.32□□□□□ -0.28
RNF2Q99496 AC138894.3-201ENST00000603787 634 ntBASIC13.32□□□□□ -0.28
RNF2Q99496 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
RNF2Q99496 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.32□□□□□ -0.28
RNF2Q99496 LINC02228-204ENST00000642115 2962 ntBASIC13.32□□□□□ -0.28
RNF2Q99496 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.32□□□□□ -0.28
RNF2Q99496 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RNF2Q99496 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RNF2Q99496 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RNF2Q99496 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.32□□□□□ -0.28
RNF2Q99496 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 AC092171.3-201ENST00000610122 2651 ntBASIC13.32□□□□□ -0.28
RNF2Q99496 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RNF2Q99496 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.32□□□□□ -0.28
RNF2Q99496 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RNF2Q99496 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 NUS1P2-201ENST00000417358 873 ntBASIC13.31□□□□□ -0.28
RNF2Q99496 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.31□□□□□ -0.28
RNF2Q99496 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RNF2Q99496 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RNF2Q99496 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms