Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PHOX2BQ99453 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.82■□□□□ 0.28
PHOX2BQ99453 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 ACTG1P4-201ENST00000425123 1122 ntBASIC16.81■□□□□ 0.28
PHOX2BQ99453 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 AC007967.4-201ENST00000614700 386 ntBASIC16.81■□□□□ 0.28
PHOX2BQ99453 AC006213.4-201ENST00000616184 634 ntBASIC16.81■□□□□ 0.28
PHOX2BQ99453 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.81■□□□□ 0.28
PHOX2BQ99453 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.81■□□□□ 0.28
PHOX2BQ99453 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PHOX2BQ99453 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 WASH6P-202ENST00000359512 1437 ntBASIC16.8■□□□□ 0.28
PHOX2BQ99453 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 U62317.3-201ENST00000608319 855 ntBASIC16.8■□□□□ 0.28
PHOX2BQ99453 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
PHOX2BQ99453 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PHOX2BQ99453 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms