Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SNX27Q96L92 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNX27Q96L92 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.89■□□□□ 0.45
SNX27Q96L92 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNX27Q96L92 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNX27Q96L92 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SNX27Q96L92 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX27Q96L92 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX27Q96L92 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SNX27Q96L92 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.88■□□□□ 0.45
SNX27Q96L92 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.88■□□□□ 0.45
SNX27Q96L92 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.88■□□□□ 0.45
SNX27Q96L92 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SNX27Q96L92 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX27Q96L92 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.88■□□□□ 0.45
SNX27Q96L92 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNX27Q96L92 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.88■□□□□ 0.45
SNX27Q96L92 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.88■□□□□ 0.45
SNX27Q96L92 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
SNX27Q96L92 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.88■□□□□ 0.45
SNX27Q96L92 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNX27Q96L92 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX27Q96L92 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.88■□□□□ 0.45
SNX27Q96L92 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.88■□□□□ 0.45
SNX27Q96L92 RNA5SP421-201ENST00000516864 134 ntBASIC17.88■□□□□ 0.45
SNX27Q96L92 CR383656.12-201ENST00000549567 513 ntBASIC17.88■□□□□ 0.45
SNX27Q96L92 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.88■□□□□ 0.45
SNX27Q96L92 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.88■□□□□ 0.45
SNX27Q96L92 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX27Q96L92 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNX27Q96L92 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNX27Q96L92 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.88■□□□□ 0.45
SNX27Q96L92 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SNX27Q96L92 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SNX27Q96L92 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.87■□□□□ 0.45
SNX27Q96L92 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.87■□□□□ 0.45
SNX27Q96L92 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNX27Q96L92 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.87■□□□□ 0.45
SNX27Q96L92 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.87■□□□□ 0.45
SNX27Q96L92 CNN2P2-201ENST00000443536 909 ntBASIC17.87■□□□□ 0.45
SNX27Q96L92 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.87■□□□□ 0.45
SNX27Q96L92 CNN2P3-201ENST00000450201 906 ntBASIC17.87■□□□□ 0.45
SNX27Q96L92 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.87■□□□□ 0.45
SNX27Q96L92 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SNX27Q96L92 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.87■□□□□ 0.45
SNX27Q96L92 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.87■□□□□ 0.45
SNX27Q96L92 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.87■□□□□ 0.45
SNX27Q96L92 AC020765.3-201ENST00000613051 740 ntBASIC17.87■□□□□ 0.45
SNX27Q96L92 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNX27Q96L92 AL136317.3-201ENST00000618497 906 ntBASIC17.87■□□□□ 0.45
SNX27Q96L92 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
SNX27Q96L92 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.87■□□□□ 0.45
SNX27Q96L92 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.87■□□□□ 0.45
SNX27Q96L92 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.87■□□□□ 0.45
SNX27Q96L92 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
SNX27Q96L92 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNX27Q96L92 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SNX27Q96L92 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.86■□□□□ 0.45
SNX27Q96L92 HLA-A-202ENST00000376806 1854 ntBASIC17.86■□□□□ 0.45
SNX27Q96L92 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SNX27Q96L92 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
SNX27Q96L92 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SNX27Q96L92 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SNX27Q96L92 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNX27Q96L92 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SNX27Q96L92 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX27Q96L92 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX27Q96L92 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.86■□□□□ 0.45
SNX27Q96L92 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms