Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 AC013467.2-201ENST00000605472 835 ntBASIC14.54□□□□□ -0.08
CPNE2Q96FN4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CPNE2Q96FN4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 AL645728.1-201ENST00000366221 2101 ntBASIC14.53□□□□□ -0.08
CPNE2Q96FN4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.53□□□□□ -0.08
CPNE2Q96FN4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 AP002383.4-201ENST00000442518 975 ntBASIC14.53□□□□□ -0.08
CPNE2Q96FN4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 AC099336.1-202ENST00000602961 463 ntBASIC14.53□□□□□ -0.08
CPNE2Q96FN4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 AC006449.5-201ENST00000610658 2098 ntBASIC14.53□□□□□ -0.08
CPNE2Q96FN4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 AL513523.2-202ENST00000427283 2040 ntBASIC14.53□□□□□ -0.08
CPNE2Q96FN4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE2Q96FN4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CPNE2Q96FN4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms