Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SMIM4Q8WVI0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 MIR648-201ENST00000385046 94 ntBASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 ITM2C-210ENST00000620962 501 ntBASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 AL023973.1-201ENST00000624619 620 ntBASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 AC138035.3-201ENST00000622706 2791 ntBASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMIM4Q8WVI0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 AL109954.1-202ENST00000564051 2148 ntBASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 NUS1P1-201ENST00000446295 882 ntBASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 CD99P1-205ENST00000527459 561 ntBASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms