Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 AC013467.2-201ENST00000605472 835 ntBASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 KRT8P49-201ENST00000604166 1432 ntBASIC15.26■□□□□ 0.03
CNIH3Q8TBE1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNIH3Q8TBE1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 KRT18P22-201ENST00000402024 1347 ntBASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 AC097637.2-201ENST00000624096 1997 ntBASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 AL596275.1-201ENST00000423464 877 ntBASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 SLC25A3P1-201ENST00000443844 931 ntBASIC15.24■□□□□ 0.03
CNIH3Q8TBE1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms